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PLM4_90_b1_sep16_scaffold_6392

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_6392_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1374)
DNA (1374bp) protein (458aa)
Sigma-54 dependent transcriptional regulator Tax=Candidatus Nitrospira defluvii RepID=D8PDL1_9BACT
sigma-54 dependent transcriptional regulator
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_6392_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1549..2643)
DNA (1095bp) protein (365aa)
Putative Histidine kinase, contains GAF domain bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
two component sigma-54 specific Fis family transcriptional regulator
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_6392_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2806..4041)
DNA (1236bp) protein (412aa)
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase, contains GAF domain Tax=Candidatus Nitrospira defluvii RepID=D8PBW7_9BACT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_6392_4
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4088..4897)
DNA (810bp) protein (270aa)
Putative Histidine kinase, contains GAF domain bin=GWF2_OP3_43_52 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
integral membrane sensor signal transduction histidine kinase
Tax=CG_Desulfob_01
PLM4_90_b1_sep16_scaffold_6392_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4913..6148)
DNA (1236bp) protein (412aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI000371503A
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_6392_6
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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comp(6212..7174)
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
nucleoside-diphosphate sugar epimerase
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
PLM4_90_b1_sep16_scaffold_6392_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7515..7715
DNA (201bp) protein (67aa)
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_6392_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7702..8028
DNA (327bp) protein (109aa)
Putative regulatory protein (CxxC_CxxC_SSSS) Tax=delta proteobacterium NaphS2 RepID=D8F673_9DELT
regulatory protein, FmdB
Tax=RBG_13_Deltaproteobacteria_47_9_curated
Displaying 8 items

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