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PLM4_90_b1_sep16_scaffold_1871

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1871_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IMP4_9PLAN
putative ATP-grasp enzyme
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(438..1127)
DNA (690bp) protein (230aa)
DNA repair protein RadC Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEJ4_RHOMR
DNA repair protein RadC
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1134..1937)
DNA (804bp) protein (268aa)
Sec-independent protein translocase protein TatC Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXN7_SYNAS
sec-independent protein translocase protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1930..2331)
DNA (402bp) protein (134aa)
Sec-independent protein translocase protein TatA Tax=Desulfococcus multivorans DSM 2059 RepID=S7TMD1_DESML
twin arginine translocation pathway mttA/Hcf106 family (TatB) protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2553..3320
DNA (768bp) protein (256aa)
AP endonuclease, family 2 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFP0_THEYD
AP endonuclease, family 2
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3484..4740
DNA (1257bp) protein (419aa)
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4C0_THERP
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1871_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4762..5928
DNA (1167bp) protein (389aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
inner-membrane translocator
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1871_8
unknown

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5928..6065
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_1871_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6182..7825
DNA (1644bp) protein (548aa)
Leucine/isoleucine/valine transporter permease subunit bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
leucine/isoleucine/valine transporter permease subunit
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1871_10
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8053..8739
DNA (687bp) protein (229aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Y3_CALAS
putative branched-chain amino acid ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1871_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8774..9142
DNA (369bp) protein (123aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5SHP3_9CHLR
30S ribosomal protein S23
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_1871_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9257..9934
DNA (678bp) protein (226aa)
branched-chain amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Selenomonas sp. oral taxon 149 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter-like protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying 12 items

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