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PLM4_90_b1_sep16_scaffold_5538

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_5538_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..689)
DNA (687bp) protein (229aa)
Hypothetical histidine kinase protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2U3_9BACT
sensor histidine kinase, HAMP domain-containing
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_5538_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(815..1330)
DNA (516bp) protein (172aa)
Strongly similar to two-component response regulator OmpR/PhoB family Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q2T5_9BACT
winged-helix transcriptional response regulator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_5538_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1392..2927
DNA (1536bp) protein (512aa)
Apolipoprotein N-acyltransferase Tax=Geobacter metallireducens RepID=LNT_GEOMG
lnt; apolipoprotein N-acyltransferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_5538_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3199..3942
DNA (744bp) protein (248aa)
Metallo-beta-lactamase domain protein bin=GWC2_Syntrophobacterales_56_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
zinc-dependent hydrolase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_5538_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3939..4388)
DNA (450bp) protein (150aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_5538_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4442..5311)
DNA (870bp) protein (290aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_5538_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5762..5986
DNA (225bp) protein (75aa)
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase bin=GWC2_Nitrospirae-rel_56_14 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_5538_8
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5959..6312
DNA (354bp) protein (118aa)
NADPH-dependent FMN reductase bin=GWC2_Nitrospirae_57_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
NADPH-dependent FMN reductase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_5538_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6436..7578)
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39PY1_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33693.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_90_b1_sep16_scaffold_5538_10
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..9650)
DNA (1593bp) protein (531aa)
Adenylate/guanylate cyclase catalytic domain protein Tax=Leptospira kirschneri str. JB RepID=M6C337_9LEPT
adenylate/guanylate cyclase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_5538_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9761..10777)
DNA (1017bp) protein (339aa)
Metallophosphoesterase Tax=Chthoniobacter flavus Ellin428 RepID=B4DAR2_9BACT
metallophosphoesterase
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_5538_12
unknown

Not on your lists

comp(10759..10980)
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_5538_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11157..11291)
DNA (135bp) protein (45aa)
ABC transporter, ATP-binding protein Tax=Geobacter metallireducens RepID=Q39VD8_GEOMG
ABC transporter ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_5538_14
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11266..11712)
DNA (447bp) protein (149aa)
ABC transporter related protein Tax=Thermincola potens (strain JR) RepID=D5X9C9_THEPJ
ABC transporter
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_5538_15
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11827..12249)
DNA (423bp) protein (141aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
ABC-type transport system, involved in lipoprotein release, permease component
Tax=RBG_13_Deltaproteobacteria_53_10_curated
Displaying 15 items

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