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PLM4_90_b1_sep16_scaffold_369

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_369_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1277)
DNA (1275bp) protein (425aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLQ2_9BACT
membrane-bound serine protease (ClpP class)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1339..2094)
DNA (756bp) protein (252aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037A300D
beta-lactamase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2186..2773
DNA (588bp) protein (196aa)
putative HNH endonuclease (EC:3.1.-.-)
Putative HNH endonuclease bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_369_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2950..3459
DNA (510bp) protein (170aa)
Histidine triad (HIT) protein Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1W0_FERFK
histidine triad (HIT) protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3491..3799
DNA (309bp) protein (103aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4058..4549
DNA (492bp) protein (164aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4625..6103
DNA (1479bp) protein (493aa)
NusA antitermination factor Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9X5_DESTA
NusA antitermination factor
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_369_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6169..6384
DNA (216bp) protein (72aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_369_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6388..9003
DNA (2616bp) protein (872aa)
Translation initiation factor IF-2 Tax=Geobacter sulfurreducens RepID=IF2_GEOSL
infB; translation initiation factor IF-2
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_369_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9064..9351
DNA (288bp) protein (96aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_42_51 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9369..9743
DNA (375bp) protein (125aa)
Ribosome-binding factor A Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RBFA_GEODF
ribosome-binding factor A
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_369_12
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9727..10704
DNA (978bp) protein (326aa)
tRNA pseudouridine synthase B Tax=Geobacter sulfurreducens RepID=TRUB_GEOSL
truB; tRNA pseudouridine 55 synthase
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b1_sep16_scaffold_369_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10723..10992
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RS15_SYNFM
rpsO; 30S ribosomal protein S15
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11009..12538
DNA (1530bp) protein (510aa)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Deltaproteobacteria_66_88 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
pnp; polynucleotide phosphorylase/polyadenylase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12486..13046
DNA (561bp) protein (187aa)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
pnp; polynucleotide phosphorylase/polyadenylase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_369_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13080..14402
DNA (1323bp) protein (441aa)
Peptidase M16 domain protein bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
peptidase M16 domain-containing protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_369_17
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14434..14796
DNA (363bp) protein (121aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Thermobrachium celere DSM 8682 RepID=R7RRS4_9CLOT
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 17 items

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