ggKbase home page

PLM4_90_b1_sep16_scaffold_787

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_787_1
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109..660
DNA (552bp) protein (184aa)
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_787_2
unknown

Not on your lists

745..978
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_787_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(871..3042)
DNA (2172bp) protein (724aa)
Sensor histidine kinase, HAMP and PAS domain-containing Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A224_PELCD
sensor histidine kinase, HAMP and PAS domain-containing
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_787_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3063..3635)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8F5S2_9DELT
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_787_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4370..5089)
DNA (720bp) protein (240aa)
Zn binding protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_787_6
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5150..5419
DNA (270bp) protein (90aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1Y9X2_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX27366.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
PLM4_90_b1_sep16_scaffold_787_trna_1
unknown

Not on your lists

comp(5258..5330)
DNA (73bp)
transferRNA Met
PLM4_90_b1_sep16_scaffold_787_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5480..7273)
DNA (1794bp) protein (598aa)
RNA polymerase sigma factor RpoD Tax=Geobacter RepID=A5G8S3_GEOUR
RpoD family RNA polymerase sigma factor
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_787_8
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7286..9121)
DNA (1836bp) protein (612aa)
DNA primase Tax=Geobacter sulfurreducens RepID=D7AEN2_GEOSK
DNA primase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_787_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9201..9560)
DNA (360bp) protein (120aa)
Endonuclease MutS2 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE39_DESAR
MutS2 protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_787_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9547..10260)
DNA (714bp) protein (238aa)
MutS2 protein bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
mutS2; MutS2 protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 11 items

View Taxonomy