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PLM4_90_b1_sep16_scaffold_905

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_905_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..173
DNA (171bp) protein (57aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_905_2
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

266..469
DNA (204bp) protein (68aa)
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI00036403E1
FmdB family regulatory protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

976..1074
DNA (99bp) protein (33aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_4
Smithella sp. D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1106..1327)
DNA (222bp) protein (74aa)
Membrane protein {ECO:0000313|EMBL:KFZ44432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. D17.;"
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
PLM4_90_b1_sep16_scaffold_905_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1730..2326)
DNA (597bp) protein (199aa)
50S ribosomal protein L17 Tax=uncultured bacterium RepID=K1ZNW8_9BACT
rplQ; 50S ribosomal protein L17
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2336..3352)
DNA (1017bp) protein (339aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAU6_GEOUR
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3365..3991)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_905_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4115..4504)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJB3_DESAR
30S ribosomal protein S11
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_905_9
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4592..4996)
DNA (405bp) protein (135aa)
30S ribosomal protein S13 Tax=Syntrophus aciditrophicus (strain SB) RepID=RS13_SYNAS
rpsM; 30S ribosomal protein S13
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b1_sep16_scaffold_905_10
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5219..5437)
DNA (219bp) protein (73aa)
translation initiation factor 1
Translation initiation factor IF-1 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_905_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5457..6110)
DNA (654bp) protein (218aa)
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=KAD_GEODF
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_905_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6154..7482)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9D4_DESML
secY; preprotein translocase subunit SecY
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7479..7760)
DNA (282bp) protein (94aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 bin=bin3_NC10 species=Thermoanaerobacterium xylanolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L15
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7940..8119)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2M3_SPHTD
50S ribosomal protein L30
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_15
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8131..8625)
DNA (495bp) protein (165aa)
30S ribosomal protein S5 bin=GWC2_Proteo_65_14_Ab886 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
rpsE; 30S ribosomal protein S5
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_905_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8640..8957)
DNA (318bp) protein (106aa)
50S ribosomal protein L18 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYD5_9FIRM
rplR; 50S ribosomal protein L18
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 16 items

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