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PLM4_90_b1_sep16_scaffold_2234

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2234_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1162)
DNA (1161bp) protein (387aa)
Sigma-54-dependent transcriptional response regulator Tax=Geobacter metallireducens RepID=Q39RI2_GEOMG
Fis family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1331..1999)
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZZ1_METCG
HAD-superfamily hydrolase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2008..2778)
DNA (771bp) protein (257aa)
metallophosphoesterase; K01090 protein phosphatase [EC:3.1.3.16] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
metallophosphoesterase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2896..3300)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Clostridium thermocellum RepID=E6UMT8_CLOTL
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3650..4348
DNA (699bp) protein (233aa)
Transglutaminase-like enzyme, predicted cysteine protease Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEH3_DESTA
transglutaminase-like enzyme, predicted cysteine protease
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4419..4658
DNA (240bp) protein (80aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_2234_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4749..5915)
DNA (1167bp) protein (389aa)
putative dioxygenase bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
dioxygenase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2234_8
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6045..8357)
DNA (2313bp) protein (771aa)
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_2234_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8338..8556)
DNA (219bp) protein (73aa)
Uncharacterized protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NGI0_DESAR
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_2234_10
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8557..8796)
DNA (240bp) protein (80aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_2234_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9073..10239)
DNA (1167bp) protein (389aa)
ABC transporter, ATP-binding protein Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R6L3_9THEO
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 11 items

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