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PLM4_90_b1_sep16_scaffold_2429

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2429_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..1018)
DNA (1017bp) protein (339aa)
Arabinose efflux permease family protein Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XW84_9FIRM
major facilitator superfamily transporter
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1153..1350)
DNA (198bp) protein (66aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG Tax=Avibacterium paragallinarum RepID=S6EZ10_AVIPA
mnmG; Glucose-inhibited division protein A
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1307..3001)
DNA (1695bp) protein (565aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG bin=GWC2_Deltaproteobacteria_42_51 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
gidA; tRNA (5-carboxymethylaminomethyl-U34)-formylglycinetransferase/reductase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_4
unknown

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3068..3310
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_2429_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3258..3935)
DNA (678bp) protein (226aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
4Fe-4S ferredoxin
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4156..4968)
DNA (813bp) protein (271aa)
Nif-specific regulatory protein
sta:STHERM_c13210 anfA; nitrogen fixation protein AnfA bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5004..5993
DNA (990bp) protein (330aa)
tRNA dimethylallyltransferase Tax=Desulfococcus multivorans DSM 2059 RepID=S7TGV9_DESML
tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_2429_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5990..6217
DNA (228bp) protein (76aa)
RNA chaperone Hfq Tax=Geovibrio thiophilus RepID=UPI0003B7A4D1
RNA-binding protein Hfq
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2429_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6472..7119
DNA (648bp) protein (216aa)
Segregation and condensation protein B bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
chromosome segregation and condensation protein ScpB
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2429_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7198..7875
DNA (678bp) protein (226aa)
rluB; 23S rRNA pseudouridylate synthase B (EC:4.2.1.70)
Pseudouridine synthase bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2429_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8045..8617
DNA (573bp) protein (191aa)
Phosphatidate cytidylyltransferase Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QU86_CHLT3
phosphatidate cytidylyltransferase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2429_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..9479)
DNA (885bp) protein (295aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2429_13
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9670..10848
DNA (1179bp) protein (393aa)
Sugar fermentation stimulation protein bin=GWC2_Nitrospirae-rel_56_14 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
sfsA; sugar fermentation stimulation protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 13 items

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