ggKbase home page

PLM4_90_b1_sep16_scaffold_11134

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_11134_1
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1080
DNA (1080bp) protein (360aa)
UPI0003CDDA5B related cluster Tax=unknown RepID=UPI0003CDDA5B
Extracellular ligand-binding receptor
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b1_sep16_scaffold_11134_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1519..2424
DNA (906bp) protein (302aa)
Cation diffusion facilitator family transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK9_SOLUE
cation diffusion facilitator family transporter
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_11134_3
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2514..2708
DNA (195bp) protein (65aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_11134_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2709..2990
DNA (282bp) protein (94aa)
id=3061118 bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_11134_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..3535
DNA (387bp) protein (129aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_11134_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3622..4239
DNA (618bp) protein (206aa)
Superoxide dismutase bin=GWB2_Nitrospirae_rel_47_37 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
sodA; superoxide dismutase, iron/manganese-containing
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_11134_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4502..4906
DNA (405bp) protein (135aa)
aldehyde ferredoxin oxidoreductase (EC:1.2.7.5)
Aldehyde ferredoxin oxidoreductase Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MCP0_CALMQ
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_11134_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

5053..6045
DNA (993bp) protein (331aa)
dfrA; dihydroflavonol-4-reductase (DFR) (Dihydrokaempferol 4-reductase) (EC:1.1.1.219)
hpnA; NAD-dependent nucleoside diphosphate-sugar epimerase/dehydratase bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
Displaying 8 items

View Taxonomy