ggKbase home page

PLM4_90_b1_sep16_scaffold_1788_14

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 9014..10003

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Saccharophagus degradans genus=Saccharophagus taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 323.0
  • Bit_score: 181
  • Evalue 1.30e-42
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 29.1
  • Coverage: 323.0
  • Bit_score: 122
  • Evalue 1.60e-25
Tax=RBG_16_Deltaproteobacteria_47_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 325.0
  • Bit_score: 554
  • Evalue 6.20e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Deltaproteobacteria_47_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAGAATAAAAATCTTCTTCGCTATCTTTCTCATTCTATTATCGGTCCTGGGGTGCGCCACTGCTCCGAATAAGGAACGGGCAAAGTTACCTTCTCAAAAAGTGGAGGCCCCAAAAACCCAACCTCCACCTGAGGAAAAATTAAAGGAGCTGGTGATTCCCCAAATGGAGGAGGCGAAAAAGGTTCCCGACAGACTCTTCTCCATCTACGCCAGAGATTCAAACATCCAGGATGTTCTTCTTGCCTTCTCAAAGGACAGCGAACTCAACATTGTCATCGATCCTGAACTGAATGGAAAGGTAACCATTGATTTAAAGCGCGTGACCTTAAAAGAGGCTCTGGATGCCATCATCTCTCCATTGGGTTGGACCTATCGCATGGATGGAAAATTTATCAAGATATCAAGACCCCAGATGGAAACCCGTCTTTTCACGCTTAATTATATCGCCACCAAACGAACTGGAAAGAGGGAGGTCTATGCGAGCACCAGTACAGGCGTGGGCTTGCAGACCAGTACCCTTCCAGGGCAGCAGACCCAGACCGCTCTCAGTCCAGCGGGTGCCAGGACCGGATATACTGACCTGATCAGTGTTGATGAGATGGACCTATGGAGGGAAATTCAGAACGGGTTGGAAAATTTCATTTTCGGATTCGTTGAGGAAAAGACTGAGGAAACTGTTTCTGAAGGAGGGCCTAAGAAAGAAAAGGCAACCTGGACTAAAGTGGATACAAAAGGGAAAAAATTGGTGGTCAATAAATCGACGGGGGTGATCATGGTGACCGATTACCCGATCAATCTGAATAAGGTCGCGTCCTATATCGAGACCGTTGAGGGAAGTTCCCAGAGACAAGTTAGCATCCAGGCAAAGATTATGGAGGTCATTCTCACCGACGGCCACAAAGAAGGGATCAACTGGAAGGTGATCGAAGGGCTTCCCCGTTCCATTAACGTAGCCTGGGGACTTACGAATAACAGGAACAACCATTAA
PROTEIN sequence
Length: 330
MRIKIFFAIFLILLSVLGCATAPNKERAKLPSQKVEAPKTQPPPEEKLKELVIPQMEEAKKVPDRLFSIYARDSNIQDVLLAFSKDSELNIVIDPELNGKVTIDLKRVTLKEALDAIISPLGWTYRMDGKFIKISRPQMETRLFTLNYIATKRTGKREVYASTSTGVGLQTSTLPGQQTQTALSPAGARTGYTDLISVDEMDLWREIQNGLENFIFGFVEEKTEETVSEGGPKKEKATWTKVDTKGKKLVVNKSTGVIMVTDYPINLNKVASYIETVEGSSQRQVSIQAKIMEVILTDGHKEGINWKVIEGLPRSINVAWGLTNNRNNH*