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PLM4_90_b1_sep16_scaffold_1788

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1788_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..607
DNA (606bp) protein (202aa)
alkaline phosphatase synthesis sensor protein PhoR (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase Tax=uncultured bacterium RepID=K2EVE8_9BACT
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_2
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

611..982
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E8U2_9BACT
two component transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1071..1427
DNA (357bp) protein (119aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1476..2483
DNA (1008bp) protein (336aa)
Type II secretion system F domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
general secretion pathway protein F
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_5
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2446..2652
DNA (207bp) protein (69aa)
type ii secretion system f domain; K12278 MSHA biogenesis protein MshG bin=GWC2_NOV_55_46 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_NOV_55_46 organism_group=Proteobacteria
type II secretion system F domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_6
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2679..3080
DNA (402bp) protein (134aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_7
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3025..3501
DNA (477bp) protein (159aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3667..4065
DNA (399bp) protein (133aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1788_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4125..4721
DNA (597bp) protein (199aa)
Putative uncharacterized protein bin=GWE2_Gammaproteobacteria_42_36 species=Legionella drancourtii genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gammaproteobacteria_42_36 organism_group=Gammaproteobacteria organism_desc=Small but looks good
MSHA biogenesis protein MshO
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1788_10
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4862..5962
DNA (1101bp) protein (367aa)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1788_11
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6078..7880
DNA (1803bp) protein (601aa)
Putative Type IV pilus biogenesis protein PilM (Modular protein) Tax=Nitrospina gracilis 3/211 RepID=M1ZB62_9BACT
type IV pilus assembly protein PilM
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7884..8450
DNA (567bp) protein (189aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8586..9017
DNA (432bp) protein (144aa)
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9014..10003
DNA (990bp) protein (330aa)
Type II and III secretion system protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Saccharophagus degradans genus=Saccharophagus taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
type II and III secretion system protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10089..10634
DNA (546bp) protein (182aa)
mshL; MSHA biogenesis protein MshL; K12282 MSHA biogenesis protein MshL bin=bin3_NC10 species=Enterovibrio calviensis genus=Enterovibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
type IV pilus secretin MshL
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1788_16
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10858..11016
DNA (159bp) protein (53aa)
Peptidoglycan-binding domain 1 protein bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
general secretion pathway protein GspA
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 16 items

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