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PLM4_90_b1_sep16_scaffold_253_5

Organism: PLM4_90_b1_sep16_Deltaproteobacteria_48_13

near complete RP 45 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 10 / 38
Location: 3617..4162

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A379_PELCD similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 183.0
  • Bit_score: 149
  • Evalue 2.30e-33
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 178.0
  • Bit_score: 151
  • Evalue 1.30e-34
Tax=RBG_16_Deltaproteobacteria_48_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 181.0
  • Bit_score: 331
  • Evalue 4.70e-88

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Taxonomy

RBG_16_Deltaproteobacteria_48_10_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCAGGTCGCAGTGACATTTCGACACATGAAGACCCACGAAGGGGTCAAGGCCTATGTGAAGGAGAAGGTGGAGAAACTTCGAAAATATATTGAGAACCCGAGGGAAGTCCATGTCGTTCTGGCGGTTGAAAAATTCCGGCATATTGCAGAGATCACCGTTGTCGGGAACGGAGGGATTTTCAATAGCCAGGGAAGGGATAACGATCTCTATGCCGCCATCGATCAGATGGTGGACAAGATGGAGCGACAGGTTCGTGAACGGAGGGAGAAGGCAAGACGAAAAAGAGCTGATTCCTCTTCACCGAAGTCCCCCCTCCGACGGAGCGGAAAGGCCGGAGAGGAGAAAGAAGAAGGAGATCTTTCCTCCCTCGTCCAGCGGAGACGAACGGTCGCCAAACCCATGTCTCTTGAGGAAGCGCTCTCTCAATTGCGCCTTTCGAAAAAGGATTTTTTGGTATTTTTCAATTCGGATTCCGGGCAGATGAACGTCGTCTATCGGTCTAAAGACGGGAGTTACGGATGGGTGGAGGCTCATCCGAAATAG
PROTEIN sequence
Length: 182
MQVAVTFRHMKTHEGVKAYVKEKVEKLRKYIENPREVHVVLAVEKFRHIAEITVVGNGGIFNSQGRDNDLYAAIDQMVDKMERQVRERREKARRKRADSSSPKSPLRRSGKAGEEKEEGDLSSLVQRRRTVAKPMSLEEALSQLRLSKKDFLVFFNSDSGQMNVVYRSKDGSYGWVEAHPK*