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PLM4_90_b1_sep16_scaffold_253

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_253_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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46..618
DNA (573bp) protein (191aa)
Lipopolysaccharide ABC transporter, periplasmic protein LptC bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

615..1202
DNA (588bp) protein (196aa)
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1297..2058
DNA (762bp) protein (254aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter ATP-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2092..3543
DNA (1452bp) protein (484aa)
RNA polymerase sigma54 factor
RNA polymerase sigma-54 factor bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3617..4162
DNA (546bp) protein (182aa)
Ribosomal subunit interface-associated sigma-54 modulation protein RaiA Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A379_PELCD
pseudouridine synthase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4181..4645
DNA (465bp) protein (155aa)
PTS system transporter subunit IIA bin=bin1_lowGC species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
phosphotransferase system protein IIA
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..5617
DNA (969bp) protein (323aa)
HPr kinase/phosphorylase Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJW9_GEOSK
hprK; HPr(Ser) kinase/phosphatase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5629..6606
DNA (978bp) protein (326aa)
UPF0042 nucleotide-binding protein Geob_2284 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=Y2284_GEODF
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6613..7035
DNA (423bp) protein (141aa)
Pts system fructose IIA component Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LSZ1_SYNAS
pts system fructose IIA component
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7232..7498
DNA (267bp) protein (89aa)
Phosphocarrier, HPr family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9R8_GEODF
HPr family phosphocarrier protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_11
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7501..9267
DNA (1767bp) protein (589aa)
phosphoenolpyruvate-protein phosphotransferase
Phosphoenolpyruvate-protein phosphotransferase bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_253_12
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9368..10525
DNA (1158bp) protein (386aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_253_13
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10547..11950
DNA (1404bp) protein (468aa)
Adenosylhomocysteinase Tax=delta proteobacterium NaphS2 RepID=D8FF04_9DELT
S-adenosyl-L-homocysteine hydrolase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_253_14
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11982..13046
DNA (1065bp) protein (355aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=uncultured Desulfobacterium sp. RepID=E1YDK5_9DELT
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_253_15
unknown

Not on your lists

13085..13243
DNA (159bp) protein (53aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_253_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13171..13794)
DNA (624bp) protein (208aa)
CDP-alcohol phosphatidyltransferase family protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative phosphatidylinositol synthase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 16 items

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