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PLM4_90_b1_sep16_scaffold_267

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_267_1
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..888
DNA (888bp) protein (296aa)
Ribosome-binding ATPase YchF Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7R4_GEOUR
GTP-binding protein
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM4_90_b1_sep16_scaffold_267_2
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1723..3756)
DNA (2034bp) protein (678aa)
Sigma-54-dependent transcriptional activator Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUL7_SYNAS
sigma-54-dependent transcriptional activator
Tax=CG_Syntroph_01
PLM4_90_b1_sep16_scaffold_267_3
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3816..4325)
DNA (510bp) protein (170aa)
Cyclic nucleotide-binding protein bin=GWF2_Syntrophobacterales_56_9 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
cyclic nucleotide-binding protein
Tax=CG_Syntroph_01
PLM4_90_b1_sep16_scaffold_267_4
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4448..5629)
DNA (1182bp) protein (394aa)
Ion transport 2 domain protein bin=GWC2_Syntrophobacterales_56_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Ion transport 2 domain-containing protein
Tax=CG_Syntroph_01
PLM4_90_b1_sep16_scaffold_267_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5817..7889)
DNA (2073bp) protein (691aa)
Elongation factor G 2 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
protein translation elongation factor G (EF-G)
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_267_6
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7889..8506)
DNA (618bp) protein (206aa)
Spore germination protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
spore germination protein
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM4_90_b1_sep16_scaffold_267_7
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8821..9405)
DNA (585bp) protein (195aa)
Hydrolase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM2_SYNAS
hydrolase
Hydrolase {ECO:0000313|EMBL:ABC77786.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM4_90_b1_sep16_scaffold_267_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9407..9625)
DNA (219bp) protein (73aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUN1_SYNAS
cytoplasmic protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_267_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9889..11544
DNA (1656bp) protein (552aa)
LysM domain protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM9_SYNAS
lysM domain-containing protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_267_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11541..12518
DNA (978bp) protein (326aa)
tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase / fibronectin/fibrinogen-binding protein (EC:2.1.1.61)
Putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / fibronectin/fibrinogen-binding protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM8_SYNAS
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_267_11
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12519..14051)
DNA (1533bp) protein (511aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM7_SYNAS
cytoplasmic protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_267_12
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14321..15022)
DNA (702bp) protein (234aa)
FHA domain-containing protein bin=GWA2_Elusimicrobia_66_18 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
FHA domain-containing protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM4_90_b1_sep16_scaffold_267_13
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15026..15475)
DNA (450bp) protein (150aa)
Protein serine/threonine phosphatase bin=GWF2_Nitrospirae_44_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
serine/threonine protein phosphatase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
Displaying 13 items

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