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PLM4_90_b1_sep16_scaffold_453

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_453_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..619)
DNA (618bp) protein (206aa)
Tetratricopeptide repeat family protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM3_SYNAS
hypothetical protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(821..2566)
DNA (1746bp) protein (582aa)
Type IV secretion Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWT2_SYNAS
type IV secretion
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2563..3126)
DNA (564bp) protein (188aa)
Hypothetical exported protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWT1_SYNAS
hypothetical protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_4
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3098..3814)
DNA (717bp) protein (239aa)
Pili assembly protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
pili assembly protein
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM4_90_b1_sep16_scaffold_453_5
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3819..4367)
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YAX9_9BACT
pili assembly protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_90_b1_sep16_scaffold_453_6
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..5494)
DNA (1131bp) protein (377aa)
Pili assembly protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWT8_SYNAS
pili assembly protein
Tax=CG_Syntroph_01
PLM4_90_b1_sep16_scaffold_453_7
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5529..5849)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XBB4_9BACT
septum formation initiator
Tax=BJP_IG2069_Syntrophobacterales_46_30
PLM4_90_b1_sep16_scaffold_453_8
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5851..6075)
DNA (225bp) protein (75aa)
Transcriptional regulator, XRE family Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FH95_DESAA
Uncharacterized protein {ECO:0000313|EMBL:KFN39703.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. F21.;"
XRE family transcriptional regulator
PLM4_90_b1_sep16_scaffold_453_9
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6425..7603)
DNA (1179bp) protein (393aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWT6_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC78546.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM4_90_b1_sep16_scaffold_453_10
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7756..8202)
DNA (447bp) protein (149aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_11
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8219..9475)
DNA (1257bp) protein (419aa)
Zinc-dependent peptidase, M16 family bin=GWC2_Syntrophobacterales_56_13 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
zinc-dependent peptidase
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_12
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9465..11645)
DNA (2181bp) protein (727aa)
polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_13
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11614..11880)
DNA (267bp) protein (89aa)
30S ribosomal protein S15
30S ribosomal protein S15 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_90_b1_sep16_scaffold_453_14
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11956..12909)
DNA (954bp) protein (318aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_453_15
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12914..13582)
DNA (669bp) protein (223aa)
Phosphoesterase, DHH family protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWU0_SYNAS
phosphoesterase, DHH family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
Displaying 15 items

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