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PLM4_90_b1_sep16_scaffold_912

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_912_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97..708
DNA (612bp) protein (204aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH9_SYNAS
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(840..2084)
DNA (1245bp) protein (415aa)
Nramp family metal ion transport protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
manganese transporter NRAMP
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2152..3411)
DNA (1260bp) protein (420aa)
Mg/Co/Ni transporter MgtE domain protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVH7_SYNAS
Mg2+/Co2+ transporter
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_4
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3674..4216
DNA (543bp) protein (181aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM4_90_b1_sep16_scaffold_912_5
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..5264
DNA (924bp) protein (308aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_6
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5428..6735
DNA (1308bp) protein (436aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_7
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6732..7514
DNA (783bp) protein (261aa)
DNA repair protein RecO bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
DNA repair protein
Tax=GWC2_Syntrophus_56_31_curated
PLM4_90_b1_sep16_scaffold_912_8
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7646..8524
DNA (879bp) protein (293aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00254}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00254};; Glycyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00254}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00254};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Glycine--tRNA ligase alpha subunit Tax=Syntrophus aciditrophicus (strain SB) RepID=SYGA_SYNAS
PLM4_90_b1_sep16_scaffold_912_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9156..10790
DNA (1635bp) protein (545aa)
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit Tax=Syntrophus aciditrophicus (strain SB) RepID=SYGB_SYNAS
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_912_10
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10967..13294
DNA (2328bp) protein (776aa)
General secretion pathway protein E bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
general secretion pathway protein E
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_90_b1_sep16_scaffold_912_11
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13390..13941)
DNA (552bp) protein (184aa)
DNA mismatch repair protein MutS bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
DNA mismatch repair protein MutS
Tax=RBG_16_Deltaproteobacteria_58_17_curated
Displaying 11 items

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