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PLM4_90_b1_sep16_scaffold_2878

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2878_1
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..666)
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWV5_SYNAS
hypothetical protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
PLM4_90_b1_sep16_scaffold_2878_2
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(734..1168)
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM4_90_b1_sep16_scaffold_2878_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1301..2275)
DNA (975bp) protein (325aa)
ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_2878_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2287..3717)
DNA (1431bp) protein (477aa)
selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_2878_5
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3725..4963)
DNA (1239bp) protein (413aa)
coproporphyrinogen III oxidase (EC:1.3.1.-)
Coproporphyrinogen oxidase (NAD) bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_2878_6
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5125..5574
DNA (450bp) protein (150aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Peptide deformylase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LWW1_SYNAS
Displaying 6 items

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