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ERMLT300_2_curated_scaffold_2000

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT300_2_curated_scaffold_2000_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..682
DNA (681bp) protein (227aa)
Translation initiation factor IF-2 (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZDD8_9ZZZZ
translation initiation factor IF-2
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

751..1128
DNA (378bp) protein (126aa)
Ribosome-binding factor A n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAA8_9PROT
rbfA; ribosome-binding factor A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1125..2087
DNA (963bp) protein (321aa)
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=uncultured bacterium RepID=K2EDX9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2147..2416
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RS15_NITMU
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2557..3576
DNA (1020bp) protein (340aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK3_9PROT
polynucleotide phosphorylase/polyadenylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3576..4580
DNA (1005bp) protein (335aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK3_9PROT
polynucleotide phosphorylase/polyadenylase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4662..5084)
DNA (423bp) protein (141aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHF7_NITSI
TraR/DksA family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_trna_1
unknown

Not on your lists

5313..5385
DNA (73bp)
transferRNA Arg
ERMLT300_2_curated_scaffold_2000_trna_2
unknown

Not on your lists

5500..5571
DNA (72bp)
transferRNA His
ERMLT300_2_curated_scaffold_2000_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5654..6130)
DNA (477bp) protein (159aa)
SsrA-binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI79_9PROT
smpB; SsrA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6244..6651
DNA (408bp) protein (136aa)
Oligoketide cyclase/lipid transport protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPC3_AZOSU
cyclase/dehydrase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6655..6954
DNA (300bp) protein (100aa)
Protein RnfH n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S217_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7046..7504)
DNA (459bp) protein (153aa)
Putative uncharacterized protein id=2037064 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT300_2_curated_scaffold_2000_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7619..9082
DNA (1464bp) protein (488aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRW6_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT300_2_curated_scaffold_2000_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9085..9687
DNA (603bp) protein (201aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA23_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 15 items

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