ggKbase home page

ERMLT660_16_10D_curated_scaffold_4

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT660_16_10D_curated_scaffold_4_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1831)
DNA (1830bp) protein (610aa)
Phosphomethylpyrimidine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=THIC_NITMU
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_4_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2045..2710
DNA (666bp) protein (222aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADT8_9PROT
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2736..4175
DNA (1440bp) protein (480aa)
TolC family type I secretion outer membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8S1_9PROT
TolC family type I secretion outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..4863
DNA (531bp) protein (177aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWE3_RUBXD
5-formyltetrahydrofolate cyclo-ligase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4939..6189)
DNA (1251bp) protein (417aa)
3-deoxy-D-manno-octulosonic-acid transferase domain protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK31_9PROT
3-deoxy-D-manno-octulosonic-acid transferase domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6189..7151)
DNA (963bp) protein (321aa)
Lipopolysaccharide heptosyltransferase I n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF8_9PROT
lipopolysaccharide heptosyltransferase I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMLT660_16_10D_curated_scaffold_4_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7246..8319
DNA (1074bp) protein (358aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI00_THIDA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_4_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8380..8610
DNA (231bp) protein (77aa)
prevent-host-death family protein id=14624995 bin=bin5_DeltaP species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
prevent-host-death family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_4_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8607..8993
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z435_9GAMM
PilT protein domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_4_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9007..9882
DNA (876bp) protein (292aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=12495429 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glucose-1-phosphate thymidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9879..10421
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABF6_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10421..11317
DNA (897bp) protein (299aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQB5_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_4_13
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11336..12514)
DNA (1179bp) protein (393aa)
Uncharacterized protein id=1955141 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
ERMLT660_16_10D_curated_scaffold_4_14
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12841..13653)
DNA (813bp) protein (271aa)
Putative sugar-phosphate nucleotidyl transferase {ECO:0000313|EMBL:CCE08479.1}; EC=2.7.7.13 {ECO:0000313|EMBL:CCE08479.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
sugar-phosphate nucleotidyl transferase (EC:2.7.7.13)
Putative sugar-phosphate nucleotidyl transferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TPU1_9BRAD
ERMLT660_16_10D_curated_scaffold_4_15
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13687..14196)
DNA (510bp) protein (170aa)
SAM-dependent methyltransferase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RU08_RHIET
SAM-dependent methyltransferase protein
SAM-dependent methyltransferase protein {ECO:0000313|EMBL:AGS20640.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
ERMLT660_16_10D_curated_scaffold_4_16
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14380..15873)
DNA (1494bp) protein (498aa)
Cytidyltransferase-related enzyme n=1 Tax=Herbaspirillum sp. CF444 RepID=J2TRS5_9BURK
Bifunctional protein HldE {ECO:0000256|SAAS:SAAS00232998}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
cytidyltransferase-related domain-containing protein
ERMLT660_16_10D_curated_scaffold_4_17
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(16039..17088)
DNA (1050bp) protein (350aa)
Alcohol dehydrogenase superfamily, zinc-containing:Alcohol dehydrogenase, zinc-containing n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTW0_9CHLB
Alcohol dehydrogenase superfamily, zinc-containing:Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:EAT59792.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
zinc-containing alcohol dehydrogenase superfamily protein
ERMLT660_16_10D_curated_scaffold_4_18
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(17098..17769)
DNA (672bp) protein (224aa)
Methyltransferase n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTV9_9CHLB
Methyltransferase {ECO:0000313|EMBL:EAT59793.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
SAM-dependent methyltransferase
ERMLT660_16_10D_curated_scaffold_4_19
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17779..18798)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00037FD28E
Uncharacterized protein {ECO:0000313|EMBL:EIJ48591.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
aminoglycoside phosphotransferase
ERMLT660_16_10D_curated_scaffold_4_20
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18780..19400)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002D6E7E5
Uncharacterized protein {ECO:0000313|EMBL:EIJ48590.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
hypothetical protein
ERMLT660_16_10D_curated_scaffold_4_21
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19422..20357)
DNA (936bp) protein (312aa)
transketolase (EC:2.2.1.1)
transketolase n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002EF39F8
Putative transketolase {ECO:0000313|EMBL:EIJ48589.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
ERMLT660_16_10D_curated_scaffold_4_22
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20354..21187)
DNA (834bp) protein (278aa)
transketolase n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031A2962
Transketolase subunit A {ECO:0000313|EMBL:EIJ48588.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;"
putative transketolase N-terminal section
ERMLT660_16_10D_curated_scaffold_4_23
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21198..22196)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002E8AAA3
dTDP-glucose 4,6-dehydratase
Tax=GWA2_Polynucleobacter_45_21_curated
ERMLT660_16_10D_curated_scaffold_4_24
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22197..22790)
DNA (594bp) protein (198aa)
Putative Phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T089_9BRAD
Phosphoheptose isomerase {ECO:0000313|EMBL:EJL81422.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
putative phosphoheptose isomerase
ERMLT660_16_10D_curated_scaffold_4_25
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22787..23725)
DNA (939bp) protein (313aa)
sugar-nucleotide epimerase/dehydratase (EC:5.1.3.2)
Putative sugar-nucleotide epimerase/dehydratase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EN47_BRASB
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
ERMLT660_16_10D_curated_scaffold_4_26
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23952..25091
DNA (1140bp) protein (380aa)
Methyltransferase type 11 n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QHE0_METSZ
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:CCJ07541.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
ERMLT660_16_10D_curated_scaffold_4_27
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25102..26088
DNA (987bp) protein (329aa)
id=4364468 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
ERMLT660_16_10D_curated_scaffold_4_28
unknown

Not on your lists

26094..27128
DNA (1035bp) protein (345aa)

This feature has no annotations

ERMLT660_16_10D_curated_scaffold_4_29
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27197..27994
DNA (798bp) protein (266aa)
Putative Macrocin-O-methyltransferase id=2590793 bin=GWC2_Nitrospirae-rel_56_14 species=Cylindrospermopsis raciborskii genus=Cylindrospermopsis taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
O-methyltransferase
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
ERMLT660_16_10D_curated_scaffold_4_30
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28038..29489)
DNA (1452bp) protein (484aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TX10_DESML
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:EPR41290.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
putative membrane protein involved in D-alanine export
Displaying items 1-30 of 44 in total

View Taxonomy