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ERMLT660_16_10D_curated_scaffold_87

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT660_16_10D_curated_scaffold_87_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)
Cytochrome cd1 nitrite reductase n=2 Tax=Azoarcus RepID=H0Q2D4_9RHOO
nirS; cytochrome cd1 nitrite reductase precursor
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_87_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

573..1487
DNA (915bp) protein (305aa)
Siroheme synthase {ECO:0000255|HAMAP-Rule:MF_01646}; Includes:; Uroporphyrinogen-III C-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01646}; Short=Urogen III methylase {ECO:0000255|HAMAP-Rule:MF_01646};; EC=2.1.1.107 {ECO:0000255|HAMAP-Rule:MF_01646};; SUMT {ECO:0000255|HAMAP-Rule:MF_01646}; Uroporphyrinogen III methylase {ECO:0000255|HAMAP-Rule:MF_01646}; Short=UROM {ECO:0000255|HAMAP-Rule:MF_01646};; Includes:; Precorrin-2 dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01646}; EC=1.3.1.76 {ECO:0000255|HAMAP-Rule:MF_01646};; Includes:; Sirohydrochlorin ferrochelatase {ECO:0000255|HAMAP-Rule:MF_01646}; EC=4.99.1.4 {ECO:0000255|HAMAP-Rule:MF_01646};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
uroporphyrin-III C-methyltransferase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=UPI00005E6D48
uroporphyrin-III C-methyltransferase
ERMLT660_16_10D_curated_scaffold_87_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1632..1913
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003606CCD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_87_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1850..2791)
DNA (942bp) protein (314aa)
Cytochrome oxidase assembly n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K4K7_NITWC
cytochrome oxidase assembly
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMLT660_16_10D_curated_scaffold_87_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2778..4238)
DNA (1461bp) protein (487aa)
cytochrome c oxidase, subunit i id=12553488 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
cytochrome c oxidase, subunit i
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMLT660_16_10D_curated_scaffold_87_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4235..5842)
DNA (1608bp) protein (536aa)
Methyl-viologen-reducing hydrogenase delta subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSD8_ACCPU
methyl-viologen-reducing hydrogenase subunit delta
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_87_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6206..6709)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSD6_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6863..8851)
DNA (1989bp) protein (663aa)
Oxidoreductase FAD-binding domain protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSD5_ACCPU
oxidoreductase FAD-binding domain-containing protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9035..9859)
DNA (825bp) protein (275aa)
Electron transport protein SCO1/SenC n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RV11_ACCPU
electron transport protein SCO1/SenC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_87_10
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9869..10786)
DNA (918bp) protein (306aa)
Protoheme IX farnesyltransferase id=1942632 bin=GWE2_Gallionellales_58_10 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
protoheme IX farnesyltransferase
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_11
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10800..12485)
DNA (1686bp) protein (562aa)
Cytochrome c oxidase chain I (EC:1.9.3.1)
Cytochrome-c oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TQH0_ALIDB
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_12
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12529..13077)
DNA (549bp) protein (183aa)
Cytochrome c oxidase chain II (EC:1.9.3.1)
Putative heme/copper-type cytochrome/quinol oxidase subunit 2 n=1 Tax=uncultured bacterium 888 RepID=B8R8N5_9BACT
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_13
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13115..13294)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 888 RepID=B8R8N6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
ERMLT660_16_10D_curated_scaffold_87_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13574..14632
DNA (1059bp) protein (353aa)
Heme A synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIJ2_9PROT
cytochrome oxidase assembly
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMLT660_16_10D_curated_scaffold_87_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14589..15206)
DNA (618bp) protein (206aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y4N9_LEPCP
hemerythrin HHE cation-binding region
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_87_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15414..16790
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKW3_METPP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMLT660_16_10D_curated_scaffold_87_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16839..17543
DNA (705bp) protein (235aa)
Rieske-I iron sulfur protein id=5081749 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Rieske-I iron sulfur protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMLT660_16_10D_curated_scaffold_87_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17724..18005
DNA (282bp) protein (94aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
sodC; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase [Cu-Zn] n=1 Tax=Acidovorax sp. CF316 RepID=J0KH12_9BURK
Displaying 18 items

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