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ERMLT890_curated_scaffold_718

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT890_curated_scaffold_718_1
R_RIF_OD1_03_48_11, RIF-OD1-3, Parcubacteria, Bacteria

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201..524
DNA (324bp) protein (108aa)
RRM domain-containing RNA-binding protein id=3462007 bin=GWA1_Deltaproteobacteria_52_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RNP-1 like RNA-binding protein, Glycine-rich
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_03_48_11_curated
ERMLT890_curated_scaffold_718_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(521..2686)
DNA (2166bp) protein (722aa)
DNA ligase n=2 Tax=Geobacter sulfurreducens RepID=DNLJ_GEOSL
ligA; NAD-dependent DNA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMLT890_curated_scaffold_718_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2709..4391
DNA (1683bp) protein (561aa)
Tetratricopeptide repeat family protein id=3853144 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ERMLT890_curated_scaffold_718_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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4388..5209
DNA (822bp) protein (274aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMLT890_curated_scaffold_718_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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5255..7000
DNA (1746bp) protein (582aa)
extracellular solute-binding protein id=14424422 bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMLT890_curated_scaffold_718_6
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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7009..8037
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003740DE2
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMLT890_curated_scaffold_718_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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8075..9106
DNA (1032bp) protein (344aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein id=7717794 bin=BACIGN_2 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMLT890_curated_scaffold_718_8
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9157..10284
DNA (1128bp) protein (376aa)
Yellowish-green 1-like protein id=2153512 bin=GWD2_Deltaproteobacteria_55_8 species=Herbaspirillum frisingense genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
alpha/beta hydrolase
Tax=GWD2_Deltaproteobacteria_55_8_curated
ERMLT890_curated_scaffold_718_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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10340..10888
DNA (549bp) protein (183aa)
Putative uncharacterized protein id=4935489 bin=GWC2_Methylomirabilis_70_24 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMLT890_curated_scaffold_718_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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11038..11808
DNA (771bp) protein (257aa)
Putative oxidoreductase yxbG n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FBF3_9ALTE
yxbG; oxidoreductase yxbG
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMLT890_curated_scaffold_718_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11859..12875
DNA (1017bp) protein (339aa)
id=2052372 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMLT890_curated_scaffold_718_12
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13118..14371)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GK15_NITSI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ02825.1}; Flags: Precursor;; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
ERMLT890_curated_scaffold_718_13
unknown

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14398..14601
DNA (204bp) protein (68aa)

This feature has no annotations

ERMLT890_curated_scaffold_718_14
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14890..15876
DNA (987bp) protein (329aa)
appD; oligopeptide ABC transporter (ATP-binding protein) (EC:3.6.3.-)
Oligopeptide ABC transporter ATP-binding protein id=3907802 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMLT890_curated_scaffold_718_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15973..16950
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K591_HALHC
oligopeptide/dipeptide ABC transporter, ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMLT890_curated_scaffold_718_16
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17139..17621
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=GREA_PHEZH
greA; transcription elongation factor GreA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ERMLT890_curated_scaffold_718_17
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17663..18106
DNA (444bp) protein (148aa)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 17 items

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