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ERMZT820_2_curated_scaffold_345

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT820_2_curated_scaffold_345_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..579)
-----------------
DNA (579bp)
protein (193aa)
DNA polymerase III epsilon subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHF5_9PROT
DNA polymerase III subunit epsilon
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..1392
-----------------
DNA (768bp)
protein (256aa)
Type 11 methyltransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA01_9PROT
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1389..1835
-----------------
DNA (447bp)
protein (149aa)
ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CS11_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2022..2792
-----------------
DNA (771bp)
protein (257aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y8J9_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2935..4317
-----------------
DNA (1383bp)
protein (461aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFX4_9PROT
lytic transglycosylase catalytic subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..6316)
-----------------
DNA (1980bp)
protein (660aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Thauera sp. 63 RepID=N6XEC6_9RHOO
oppD; ATPase component ABC-type dipeptide/oligopeptide/nickel transport system
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT820_2_curated_scaffold_345_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6255..7691)
-----------------
DNA (1437bp)
protein (479aa)
Oligopeptide transport system permease protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWI4_9PROT
binding-protein dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7691..8668)
-----------------
DNA (978bp)
protein (326aa)
Binding-protein dependent transport system inner membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AA00_9PROT
binding-protein dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8689..10863)
-----------------
DNA (2175bp)
protein (725aa)
Extracellular solute-binding protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AK69_9PROT
extracellular solute-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10940..11731
-----------------
DNA (792bp)
protein (264aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=Bordetella holmesii RepID=M5NN67_9BORD
enoyl-(acyl carrier protein) reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11735..13636)
-----------------
DNA (1902bp)
protein (634aa)
Peptidyl-prolyl cis-trans isomerase PpiD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DWH4_9PROT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_trna_3
unknown

Not on your lists

comp(13655..13728)
-----------------
DNA (74bp)
transferRNA Asp
ERMZT820_2_curated_scaffold_345_trna_2
unknown

Not on your lists

comp(13744..13816)
-----------------
DNA (73bp)
transferRNA Val
ERMZT820_2_curated_scaffold_345_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13983..14255)
-----------------
DNA (273bp)
protein (91aa)
DNA-binding protein HU-beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL13_9PROT
histone family protein DNA-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14682..17081)
-----------------
DNA (2400bp)
protein (800aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSU5_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17230..18498)
-----------------
DNA (1269bp)
protein (423aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CLPX_NITMU
clpX; ATP-dependent protease ATP-binding subunit ClpX
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18522..19151)
-----------------
DNA (630bp)
protein (210aa)
Clp protease proteolytic subunit ClpP n=1 Tax=Rhodocyclaceae RepID=UPI00037C3FB5
clpP; ATP-dependent Clp protease proteolytic subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_16
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19148..20455)
-----------------
DNA (1308bp)
protein (436aa)
Trigger factor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL10_9PROT
tig; trigger factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_trna_1
unknown

Not on your lists

comp(20575..20656)
-----------------
DNA (82bp)
transferRNA Leu
ERMZT820_2_curated_scaffold_345_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20761..21564
-----------------
DNA (804bp)
protein (268aa)
squalene synthase HpnC (EC:2.5.1.32)
Squalene synthase HpnC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRT8_SIDLE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_18
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21564..22397
-----------------
DNA (834bp)
protein (278aa)
Squalene/phytoene synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6I7_NITMU
squalene/phytoene synthase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_19
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22424..23179
-----------------
DNA (756bp)
protein (252aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I0Z2_9BRAD
3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_20
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23222..24346
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RJM5_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_21
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24564..25775
-----------------
DNA (1212bp)
protein (404aa)
Squalene-associated FAD-dependent desaturase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAB9_9PROT
squalene-associated FAD-dependent desaturase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_22
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25832..27481
-----------------
DNA (1650bp)
protein (550aa)
dehydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003726E70
FAD binding domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27519..28262
-----------------
DNA (744bp)
protein (248aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036F985C
amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_24
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28269..28838)
-----------------
DNA (570bp)
protein (190aa)
Putative lipoprotein transmembrane n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FT0_DECAR
lipoprotein transmembrane
Tax=RBG_16_Betaproteobacteria_56_24_curated
ERMZT820_2_curated_scaffold_345_25
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28880..30079)
-----------------
DNA (1200bp)
protein (400aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
3-ketoacyl-CoA thiolase @ Acetyl-CoA acetyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGY2_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMZT820_2_curated_scaffold_345_26
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30122..32611)
-----------------
DNA (2490bp)
protein (830aa)
Enoyl-CoA hydratase / 3,2-trans-enoyl-CoA isomerase / 3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE1_9PROT
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
Displaying 29 items

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