ggKbase home page

ERMZT100_curated_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 137 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT100_curated_scaffold_24_1
unknown

Not on your lists

comp(3..116)
DNA (114bp) protein (38aa)

This feature has no annotations

ERMZT100_curated_scaffold_24_2
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

comp(564..1706)
DNA (1143bp) protein (381aa)
Putative transport-related membrane protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z395_PHOPR
putative Na+/H+ exchange protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
ERMZT100_curated_scaffold_24_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(2681..3232)
DNA (552bp) protein (184aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=12555907 bin=CNBR_ACIDO species=Achromobacter piechaudii genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent Clp protease ATP-binding subunit clpX
Tax=GWC2_Nitrospirae_56_14_curated
ERMZT100_curated_scaffold_24_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3334..4083)
DNA (750bp) protein (250aa)
UPI0002776946 related cluster id=1975034 bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
3-oxoacyl-ACP reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_24_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4080..4823)
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3JB15_FRASU
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_24_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4820..6601)
DNA (1782bp) protein (594aa)
Long-chain acyl-CoA synthetase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH85_9BACT id=5225623 bin=16ft_combo_ws3_JS1 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative long-chain-fatty-acid--CoA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6726..8102)
DNA (1377bp) protein (459aa)
tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase n=1 Tax=Pasteurella multocida subsp. multocida str. 3480 RepID=I1VKQ1_PASMD
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8172..8990)
DNA (819bp) protein (273aa)
AP4A hydrolase id=3924849 bin=GWC2_Deltaproteobacteria_56_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_9
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

9141..9854
DNA (714bp) protein (238aa)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADH7_THEID
5-formyltetrahydrofolate cyclo-ligase
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:AEH44851.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
ERMZT100_curated_scaffold_24_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9933..10316
DNA (384bp) protein (128aa)
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase id=2113995 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured planctomycete genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_24_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10313..11203
DNA (891bp) protein (297aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=2113998 bin=GWD2_Deltaproteobacteria_55_8 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11252..12643)
DNA (1392bp) protein (464aa)
PycA2; oxaloacetate decarboxylase (EC:4.1.1.3)
Pyruvate carboxylase, C-terminal domain/subunit id=2114001 bin=GWD2_Deltaproteobacteria_55_8 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12799..13344)
DNA (546bp) protein (182aa)
id=2114004 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13337..14161)
DNA (825bp) protein (275aa)
TPR repeat-containing protein I id=2114005 bin=GWD2_Deltaproteobacteria_55_8 species=Azospirillum amazonense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TPR repeats containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14165..14350)
DNA (186bp) protein (62aa)
Uncharacterized protein id=2114008 bin=GWD2_Deltaproteobacteria_55_8 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14498..16081)
DNA (1584bp) protein (528aa)
Putative ethanolamine utilisation protein EutA id=1746305 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
eutA; Ethanolamine utilization protein eutA
Tax=GWD2_Deltaproteobacteria_55_8_curated
ERMZT100_curated_scaffold_24_17
unknown

Not on your lists

comp(16370..16672)
DNA (303bp) protein (101aa)

This feature has no annotations

ERMZT100_curated_scaffold_24_18
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16795..20106
DNA (3312bp) protein (1104aa)
Conserved uncharacterized protein id=1746347 bin=GWD2_Deltaproteobacteria_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ERMZT100_curated_scaffold_24_19
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20114..21706
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZE83_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_24_20
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21738..22763
DNA (1026bp) protein (342aa)
ATPase n=1 Tax=planctomycete KSU-1 RepID=I3IJ84_9PLAN
AAA ATPase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_24_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22954..23844
DNA (891bp) protein (297aa)
Uncharacterized protein id=2028183 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_24_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23852..25951
DNA (2100bp) protein (700aa)
Uncharacterized protein id=2028184 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
ERMZT100_curated_scaffold_24_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26050..26820
DNA (771bp) protein (257aa)
Uncharacterized protein id=2028185 bin=GWD2_Deltaproteobacteria_55_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_24_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26824..29094
DNA (2271bp) protein (757aa)
Putative uncharacterized protein id=2028186 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_25
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29203..29991
DNA (789bp) protein (263aa)
Zn-dependent hydrolases of the beta-lactamase fold protein id=2107849 bin=GWD2_Deltaproteobacteria_55_8 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Zn-dependent hydrolases of the beta-lactamase fold
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_26
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30263..30571
DNA (309bp) protein (103aa)
RNA-binding protein id=1921112 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
rbpA; RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ERMZT100_curated_scaffold_24_27
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30811..31182
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT100_curated_scaffold_24_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31464..32432
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5)
Quinone oxidoreductase (NADPH:quinone reductase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHB6_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
ERMZT100_curated_scaffold_24_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(32404..32991)
DNA (588bp) protein (196aa)
hypothetical protein id=14625645 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ERMZT100_curated_scaffold_24_30
unknown

Not on your lists

33253..33399
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 137 in total

View Taxonomy