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ERMZT100_curated_scaffold_154

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Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT100_curated_scaffold_154_1
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..662
DNA (660bp) protein (220aa)
katG; catalase/peroxidase HPI (EC:1.11.1.6)
catalase/hydroperoxidase HPI(I) n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A49AF
Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
ERMZT100_curated_scaffold_154_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(802..1380)
DNA (579bp) protein (193aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=RUVA_JANMA
ruvA; RuvA holliday junction DNA helicase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_3
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1430..1963)
DNA (534bp) protein (178aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR6_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2022..2747)
DNA (726bp) protein (242aa)
Probable transcriptional regulatory protein EBAPG3_9170 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP1_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT100_curated_scaffold_154_5
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2839..4344
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFF9_METPP
hypothetical protein
Ornithine/acetylornithine aminotransferase {ECO:0000313|EMBL:EWS59423.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
ERMZT100_curated_scaffold_154_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4344..5246
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMZT100_curated_scaffold_154_7
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5264..6043
DNA (780bp) protein (260aa)
oxidoreductase n=1 Tax=Burkholderia oklahomensis RepID=UPI00016A2653
short chain dehydrogenase family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6109..8124
DNA (2016bp) protein (672aa)
Integral membrane protein-like protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02D09_SOLUE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_64_85_curated
ERMZT100_curated_scaffold_154_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8170..9351)
DNA (1182bp) protein (394aa)
Oxidoreductase, 2-nitropropane dioxygenase family n=16 Tax=pseudomallei group RepID=A3NXD1_BURP0
dihydroorotate dehydrogenase family protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9362..10147)
DNA (786bp) protein (262aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABT5_9PROT
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMZT100_curated_scaffold_154_11
unknown

Not on your lists

comp(10244..10378)
DNA (135bp) protein (45aa)

This feature has no annotations

ERMZT100_curated_scaffold_154_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10400..11890
DNA (1491bp) protein (497aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.24)
Succinate-semialdehyde dehydrogenase I n=1 Tax=Oceanibaculum indicum P24 RepID=K2IXD1_9PROT
Succinate-semialdehyde dehydrogenase I {ECO:0000313|EMBL:EKE75111.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ERMZT100_curated_scaffold_154_13
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12162..14504
DNA (2343bp) protein (781aa)
Putative hyalin n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FIS6_9GAMM
Integrin alpha beta-propellor repeat-containing protein
Tax=GWA2_Burkholderiales_64_37_curated
ERMZT100_curated_scaffold_154_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14553..15647)
DNA (1095bp) protein (365aa)
Ribosome-binding ATPase YchF n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YBH1_NITMU
ychF; GTP-dependent nucleic acid-binding protein EngD
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMZT100_curated_scaffold_154_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15647..16225)
DNA (579bp) protein (193aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB03_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_16
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16277..17041)
DNA (765bp) protein (255aa)
50S ribosomal protein L25 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CLY5_SIDLE
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMZT100_curated_scaffold_154_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17101..18051)
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RHL1_9RHOO
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_trna_1
unknown

Not on your lists

comp(18156..18229)
DNA (74bp)
transferRNA Gln
ERMZT100_curated_scaffold_154_18
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18234..19091)
DNA (858bp) protein (286aa)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ADF4_9PROT
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_19
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19079..19612)
DNA (534bp) protein (178aa)
outer-membrane lipoprotein lolB
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB id=12495674 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMZT100_curated_scaffold_154_20
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19619..21406)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB05_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMZT100_curated_scaffold_154_21
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21467..22291
DNA (825bp) protein (275aa)
mutM; formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thauera sp. 63 RepID=N6X991_9RHOO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT100_curated_scaffold_154_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22301..22789)
DNA (489bp) protein (163aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=COAD_AZOSB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
ERMZT100_curated_scaffold_154_23
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22758..23339)
DNA (582bp) protein (194aa)
RNA methyltransferase, RsmD family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJK5_AZOSU
RNA methyltransferase, RsmD family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT100_curated_scaffold_154_24
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23326..24684)
DNA (1359bp) protein (453aa)
zinc protease n=1 Tax=Methyloversatilis universalis RepID=UPI000362AD9C
putative zinc protease
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMZT100_curated_scaffold_154_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24687..26048)
DNA (1362bp) protein (454aa)
Peptidase M16-like protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B7M7_9PROT
Peptidase M16 {ECO:0000313|EMBL:KIO48831.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
peptidase M16-like protein
ERMZT100_curated_scaffold_154_26
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26119..27057
DNA (939bp) protein (313aa)
Signal recognition particle receptor FtsY n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z920_9NEIS
ftsY; signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
ERMZT100_curated_scaffold_154_27
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27067..27723
DNA (657bp) protein (219aa)
Putative ATPase involved in cell division n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJK1_AZOSU
putative ATPase involved in cell division
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMZT100_curated_scaffold_154_28
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27720..28634
DNA (915bp) protein (305aa)
Cell division protein FtsX n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K3I0_AZOSB
FtsX; cell division protein FtsX
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMZT100_curated_scaffold_154_29
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28787..29629
DNA (843bp) protein (281aa)
RNA polymerase sigma factor RpoH n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHE0_9PROT
RNA polymerase factor sigma-32
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
Displaying items 1-30 of 61 in total

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