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ERMZT100_curated_scaffold_57

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Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT100_curated_scaffold_57_1
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..5103)
DNA (5103bp) protein (1701aa)
galactose oxidase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B55448
Cytochrome c peroxidase {ECO:0000313|EMBL:EUJ10021.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein
ERMZT100_curated_scaffold_57_2
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5343..5975)
DNA (633bp) protein (211aa)
SCO1/SenC superfamily n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C7F2_ALCDB
SCO1/SenC superfamily
SCO1/SenC superfamily {ECO:0000313|EMBL:AFT69389.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5).;"
ERMZT100_curated_scaffold_57_trna_1
unknown

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6295..6367
DNA (73bp)
transferRNA Ala
ERMZT100_curated_scaffold_57_trna_2
unknown

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6389..6461
DNA (73bp)
transferRNA Glu
ERMZT100_curated_scaffold_57_3
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

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6592..8016
DNA (1425bp) protein (475aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
glutaminyl-tRNA synthetase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035FD3D0
gltX; glutamyl-tRNA synthetase
ERMZT100_curated_scaffold_57_4
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8082..8678
DNA (597bp) protein (199aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1288313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans DSM 3504.;"
Molybdenum cofactor guanylyltransferase n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FTR9_GLUOX
moaAD; bifunctional molybdenum cofactor biosynthesis protein MoaAD
ERMZT100_curated_scaffold_57_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8776..10797
DNA (2022bp) protein (674aa)
Ferric siderophore transport system, periplasmic binding protein TonB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNF2_9GAMM
Ferric siderophore transport system, periplasmic binding protein TonB {ECO:0000313|EMBL:EIM00994.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
ERMZT100_curated_scaffold_57_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11124..12290
DNA (1167bp) protein (389aa)
arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase (EC:2.6.1.-)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC7_9BACT
Tax=RBG_16_Gamma2_60_9_curated
ERMZT100_curated_scaffold_57_7
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12398..13801
DNA (1404bp) protein (468aa)
Two-component transcriptional response regulator, Fis family n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQF2_9GAMM
Fis family transcriptional regulator
Fis family transcriptional regulator {ECO:0000313|EMBL:AHK80261.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ERMZT100_curated_scaffold_57_8
Halomonas huangheensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13845..15212)
DNA (1368bp) protein (456aa)
response regulator n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE8E12
Response regulator {ECO:0000313|EMBL:ERL49901.1}; TaxID=1178482 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas huangheensis.;"
response regulator receiver protein
ERMZT100_curated_scaffold_57_9
unknown

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comp(15193..15810)
DNA (618bp) protein (206aa)

This feature has no annotations

ERMZT100_curated_scaffold_57_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15803..17278)
DNA (1476bp) protein (492aa)
Sensor histidine kinase, HAMP domain-containing id=4728802 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ATP-binding region ATPase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMZT100_curated_scaffold_57_11
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17298..18296)
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037C516C
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AHK79758.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
ERMZT100_curated_scaffold_57_12
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18856..19899
DNA (1044bp) protein (348aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037DBC7C
dusA; tRNA-dihydrouridine synthase
ERMZT100_curated_scaffold_57_13
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

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19987..20808
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI0003783D30
conserved hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
ERMZT100_curated_scaffold_57_14

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20908..21810
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00035CDF6C
Marine sediment metagenome DNA, contig: S01H1_S01083 {ECO:0000313|EMBL:GAF95162.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
adenylate/guanylate cyclase
ERMZT100_curated_scaffold_57_15
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21826..23568)
DNA (1743bp) protein (581aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Phosphoenolpyruvate carboxykinase [GTP] id=2760128 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
phosphoenolpyruvate carboxykinase
ERMZT100_curated_scaffold_57_16
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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23781..24266
DNA (486bp) protein (162aa)
Conserved repeat domain protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EIR5_CORAD
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ADE54314.1}; Flags: Precursor;; TaxID=583355 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
ERMZT100_curated_scaffold_57_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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24345..26291
DNA (1947bp) protein (649aa)
Helicase c2 n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GRE0_THISH
helicase c2
Helicase c2 {ECO:0000313|EMBL:ACL72494.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
ERMZT100_curated_scaffold_57_18
Aeromonas molluscorum, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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26288..26965
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FBCB4
Glycoprotease family protein {ECO:0000313|EMBL:EOD55501.1}; TaxID=1268236 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas molluscorum 848.;"
peptidase M22, glycoprotease
ERMZT100_curated_scaffold_57_19
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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27026..27718
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003671837
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) {ECO:0000313|EMBL:CDI03611.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
PhoB family transcriptional regulator
ERMZT100_curated_scaffold_57_20
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27715..29025
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7Z8I2_9GAMM
ERMZT100_curated_scaffold_57_21
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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29049..29789
DNA (741bp) protein (247aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2ELP3_9GAMM
phosphate uptake regulator PhoU
Tax=RBG_16_Gamma2_60_9_curated
ERMZT100_curated_scaffold_57_22
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29786..30289
DNA (504bp) protein (168aa)
Disulfide bond formation protein B n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HN57_9GAMM
Disulfide bond formation protein B {ECO:0000256|HAMAP-Rule:MF_00286}; Disulfide oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00286}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
dsbB; disulfide bond formation protein DsbB
ERMZT100_curated_scaffold_57_23
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30286..31422)
DNA (1137bp) protein (379aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082787}; Short=SDAP desuccinylase {ECO:0000256|HAMAP-Rule:MF_01690};; EC=3.5.1.18 {ECO:0000256|HAMAP-Rule:MF_01690, ECO:0000256|SAAS:SAAS00082783};; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_01690}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Succinyl-diaminopimelate desuccinylase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FCS3_9GAMM
succinyl-diaminopimelate desuccinylase
ERMZT100_curated_scaffold_57_24
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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31627..32703
DNA (1077bp) protein (359aa)
Phosphate binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FC43_9DELT
Phosphate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKH20742.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
phosphate ABC transporter substrate-binding protein, PhoT family
ERMZT100_curated_scaffold_57_25
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32833..34143
DNA (1311bp) protein (437aa)
Phosphate transport system permease protein PstC n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FHS8_9GAMM
Phosphate transport system permease protein PstC {ECO:0000313|EMBL:EGW53607.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Tevnia jerichonana (vent Tica).;"
pstC; Phosphate ABC transporter, permease protein PstC
ERMZT100_curated_scaffold_57_26
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34136..35428
DNA (1293bp) protein (431aa)
dTDP-4-dehydrorhamnose reductase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DHX7_9GAMM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EGV49776.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
pstA1; protein PstA1
ERMZT100_curated_scaffold_57_27
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35492..36361
DNA (870bp) protein (290aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
Phosphate import ATP-binding protein PstB n=2 Tax=sulfur-oxidizing symbionts RepID=G2FHT0_9GAMM
ABC-type phosphate transport system, ATPase component
ERMZT100_curated_scaffold_57_28
Enterobacter asburiae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36686..37510)
DNA (825bp) protein (275aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013419}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_00811, ECO:0000256|SAAS:SAAS00013404};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00811}; TaxID=640513 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter asburiae (strain LF7a).;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S6Z1_ENTAL
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase
Displaying items 1-30 of 88 in total

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