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ERMZT100_curated_scaffold_228

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT100_curated_scaffold_228_1
unknown

Not on your lists

comp(2..142)
DNA (141bp) protein (47aa)

This feature has no annotations

ERMZT100_curated_scaffold_228_2
unknown

Not on your lists

comp(285..1349)
DNA (1065bp) protein (355aa)

This feature has no annotations

ERMZT100_curated_scaffold_228_3
unknown

Not on your lists

comp(1368..1679)
DNA (312bp) protein (104aa)

This feature has no annotations

ERMZT100_curated_scaffold_228_4
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1944..2675
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U9D4_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMI52593.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
Rossmann fold nucleotide-binding protein
ERMZT100_curated_scaffold_228_5

Not on your lists

comp(2699..3880)
DNA (1182bp) protein (394aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=uncultured bacterium F42-01 RepID=I3VIJ1_9BACT
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:AFK79197.1}; TaxID=1191438 species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
glyceraldehyde 3-phosphate dehydrogenase
ERMZT100_curated_scaffold_228_6
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(3886..4605)
DNA (720bp) protein (240aa)
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
ERMZT100_curated_scaffold_228_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4602..6359)
DNA (1758bp) protein (586aa)
Fibronectin, type III domain protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G452_GEOUR
fibronectin I domain-containing protein
Fibronectin, type III domain protein {ECO:0000313|EMBL:ABQ26570.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ERMZT100_curated_scaffold_228_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..6690)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEQ1_ANAD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL66197.1}; Flags: Precursor;; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
ERMZT100_curated_scaffold_228_9
unknown

Not on your lists

6760..7017
DNA (258bp) protein (86aa)

This feature has no annotations

ERMZT100_curated_scaffold_228_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6957..9131)
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI0002E64AA3
aas; 2-acylglycerophosphoethanolamine acyltransferase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ERMZT100_curated_scaffold_228_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9288..11621)
DNA (2334bp) protein (778aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GT56_THISH
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ERMZT100_curated_scaffold_228_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12002..12652
DNA (651bp) protein (217aa)
protein-L-isoaspartate O-methyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037B64A0
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:CDH46547.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
protein-L-isoaspartate(D-aspartate) O-methyltransferase
ERMZT100_curated_scaffold_228_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12673..13008
DNA (336bp) protein (112aa)
Sulfurtransferase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QND4_RALPI
sulfurtransferase
Sulfurtransferase {ECO:0000313|EMBL:AGW91633.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
ERMZT100_curated_scaffold_228_14
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..14426
DNA (1374bp) protein (458aa)
type I secretion protein TolC n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000374BE18
type I secretion outer membrane protein, TolC
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
ERMZT100_curated_scaffold_228_15
Halomonas sp. PBN3, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14462..15832)
DNA (1371bp) protein (457aa)
bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (EC:2.7.1.- 2.7.7.-)
Bifunctional protein HldE n=1 Tax=Halomonas sp. PBN3 RepID=U7NHP4_9GAMM
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1397528 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. PBN3.;"
ERMZT100_curated_scaffold_228_16

Not on your lists

comp(16019..16717)
DNA (699bp) protein (233aa)
Ribonucleotide reductase, alpha subunit n=2 Tax=mine drainage metagenome RepID=T0ZEE2_9ZZZZ
Ribonucleotide reductase, alpha subunit {ECO:0000313|EMBL:EQD27194.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
ERMZT100_curated_scaffold_228_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16728..18875)
DNA (2148bp) protein (716aa)
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADV28445.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADV28445.1};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
Ribonucleoside-diphosphate reductase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWG8_PSEUU
ERMZT100_curated_scaffold_228_18
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19433..20815
DNA (1383bp) protein (461aa)
2-alkenal reductase {ECO:0000313|EMBL:ACL74025.1}; EC=1.3.1.74 {ECO:0000313|EMBL:ACL74025.1};; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
peptidase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036A2889
2-alkenal reductase
ERMZT100_curated_scaffold_228_19
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20871..21911)
DNA (1041bp) protein (347aa)
Uncharacterized conserved protein n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SUL7_JANMA
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
ERMZT100_curated_scaffold_228_20
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21958..23193
DNA (1236bp) protein (412aa)
Multifunctional CCA protein {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; CCA-adding enzyme {ECO:0000255|HAMAP-Rule:MF_01261}; EC=2.7.7.72 {ECO:0000255|HAMAP-Rule:MF_01261};; CCA tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA CCA-pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA adenylyl-/cytidylyl-transferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA nucleotidyltransferase {ECO:0000255|HAMAP-Rule:MF_01261}; tRNA-NT {ECO:0000255|HAMAP-Rule:MF_01261}; Includes:; 2'-nucleotidase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; 2',3'-cyclic phosphodiesterase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.4.- {ECO:0000255|HAMAP-Rule:MF_01261};; Includes:; Phosphatase {ECO:0000255|HAMAP-Rule:MF_01261}; EC=3.1.3.- {ECO:0000255|HAMAP-Rule:MF_01261};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
tRNA nucleotidyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003784260
tRNA nucleotidyltransferase
ERMZT100_curated_scaffold_228_21
unknown

Not on your lists

comp(23190..24068)
DNA (879bp) protein (293aa)

This feature has no annotations

ERMZT100_curated_scaffold_228_22
Spiribacter salinus, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24158..25321)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Spiribacter salinus M19-40 RepID=R4V599_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM40215.1}; TaxID=1260251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiribacter salinus M19-40.;"
ERMZT100_curated_scaffold_228_23
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25376..26137
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z4K4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIC20261.1}; Flags: Precursor;; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
pteridine reductase
ERMZT100_curated_scaffold_228_24
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26145..26627)
DNA (483bp) protein (161aa)
folK-2; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q602S4_METCA
Tax=RBG_16_Gamma2_64_10_curated
ERMZT100_curated_scaffold_228_25
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26620..26982)
DNA (363bp) protein (121aa)
Dihydroneopterin aldolase n=1 Tax=Beggiatoa sp. PS RepID=A7C521_9GAMM
dihydroneopterin aldolase family protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ERMZT100_curated_scaffold_228_26
Oleispira antarctica, Oleispira, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27002..28030)
DNA (1029bp) protein (343aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=698738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleispira.;" source="Oleispira antarctica RB-8.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Oleispira antarctica RB-8 RepID=R4YL07_OLEAN
O-sialoglycoprotein endopeptidase
ERMZT100_curated_scaffold_228_27

Not on your lists

28132..28350
DNA (219bp) protein (73aa)
Ribosomal protein S21 n=2 Tax=mine drainage metagenome RepID=T1AIA5_9ZZZZ
Ribosomal protein S21 {ECO:0000313|EMBL:EQD57007.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rpsU; 30S ribosomal protein S21
ERMZT100_curated_scaffold_228_28
Coxiella burnetii, Coxiella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28367..28816
DNA (450bp) protein (150aa)
GatB/YqeY domain protein n=5 Tax=Coxiella burnetii RepID=A9N9M5_COXBR
GatB/Yqey domain-containing protein
GatB/YqeY domain protein {ECO:0000313|EMBL:AAO91091.1}; TaxID=227377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.;" source="Coxiella burnetii (strain RSA 493 / Nine Mile phase I).;"
ERMZT100_curated_scaffold_228_29
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28880..30583
DNA (1704bp) protein (568aa)
DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Thiocapsa marina 5811 RepID=F9UAV2_9GAMM
Tax=RBG_16_Gamma2_60_9_curated
ERMZT100_curated_scaffold_228_30
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30693..32543
DNA (1851bp) protein (617aa)
RNA polymerase sigma factor RpoD n=2 Tax=sulfur-oxidizing symbionts RepID=G2DCQ8_9GAMM
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
RNA polymerase subunit sigma-70
Displaying items 1-30 of 39 in total

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