ggKbase home page

ERMZT736_2_curated_scaffold_250

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT736_2_curated_scaffold_250_1
Francisella tularensis, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2..133)
DNA (132bp) protein (44aa)
Elongation factor Tu n=15 Tax=Francisella RepID=EFTU_FRATF
translation elongation factor Tu
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=393115 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francisellaceae; Francisella.;" source="Francisella tularensis subsp. tularensis (strain FSC 198).;"
ERMZT736_2_curated_scaffold_250_2
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144..2237)
DNA (2094bp) protein (698aa)
Elongation factor G n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVP1_NITHN
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
translation elongation factor G
ERMZT736_2_curated_scaffold_250_3

Not on your lists


comp(2247..2726)
DNA (480bp) protein (160aa)
Ribosomal protein S7, bacterial-type n=1 Tax=mine drainage metagenome RepID=T1B7D0_9ZZZZ
Ribosomal protein S7, bacterial-type {ECO:0000313|EMBL:EQD65792.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
30S ribosomal protein S7
ERMZT736_2_curated_scaffold_250_4
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2742..3116)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=11 Tax=Moraxella catarrhalis RepID=D5V9Z5_MORCR
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovoculi 237.;"
rpsL; 30S ribosomal protein S12
ERMZT736_2_curated_scaffold_250_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3437..4633
DNA (1197bp) protein (399aa)
hypothetical protein id=24463449 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Lewinella cohaerens genus=Lewinella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
BNR repeat-containing protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT736_2_curated_scaffold_250_6
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4656..5540
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7C7J0_METED
Uncharacterized protein {ECO:0000313|EMBL:GAN45720.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
hypothetical protein
ERMZT736_2_curated_scaffold_250_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5578..6525
DNA (948bp) protein (316aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Quinolinate synthase A n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR24_PARL1
quinolinate synthetase complex subunit A
ERMZT736_2_curated_scaffold_250_8
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6522..8063
DNA (1542bp) protein (514aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D5EC79
Tax=RBG_16_Alphaproteobacteria_64_48_curated
ERMZT736_2_curated_scaffold_250_9
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8060..8905
DNA (846bp) protein (282aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:KJR63936.1}; EC=2.4.2.19 {ECO:0000313|EMBL:KJR63936.1};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH24_AZOL4
nadC; nicotinate-nucleotide pyrophosphorylase
ERMZT736_2_curated_scaffold_250_10
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8910..13112)
DNA (4203bp) protein (1401aa)
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036A2154
DNA-directed RNA polymerase subunit beta'
Tax=RBG_16_Gamma2_64_10_curated
ERMZT736_2_curated_scaffold_250_11
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13117..17403)
DNA (4287bp) protein (1429aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1248727 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="endosymbiont of unidentified scaly snail isolate Monju.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BVC3_9GAMM
ERMZT736_2_curated_scaffold_250_12
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17531..17914)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000370FFC8
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;"
rplL; 50S ribosomal protein L7/L12
ERMZT736_2_curated_scaffold_250_13
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17963..18487)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=RL10_METCA
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
ERMZT736_2_curated_scaffold_250_14
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18629..19324)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G743_9GAMM
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
ERMZT736_2_curated_scaffold_250_15

Not on your lists


comp(19326..19757)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=mine drainage metagenome RepID=T0ZZL9_9ZZZZ
50S ribosomal protein L11 {ECO:0000313|EMBL:EQD34274.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rplK; large subunit ribosomal protein L11
ERMZT736_2_curated_scaffold_250_16

Not on your lists

comp(19761..20294)
DNA (534bp) protein (178aa)
Transcription termination/antitermination factor NusG n=1 Tax=mine drainage metagenome RepID=T1AD99_9ZZZZ
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EQD38969.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nusG; transcription antitermination protein
ERMZT736_2_curated_scaffold_250_17
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20299..20679)
DNA (381bp) protein (127aa)
preprotein translocase subunit SecE n=1 Tax=Methylosarcina fibrata RepID=UPI0003770396
preprotein translocase subunit SecE
Tax=BJP_IG2158_Methylococcales_50_91
ERMZT736_2_curated_scaffold_250_trna_1
unknown

Not on your lists

comp(20702..20774)
DNA (73bp)
transferRNA Trp
ERMZT736_2_curated_scaffold_250_18
R_Coxiella_42_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20787..20918)
DNA (132bp) protein (44aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Beggiatoa sp. PS RepID=A7BRI4_9GAMM
Tax=RIFCSPHIGHO2_12_FULL_Coxiella_42_15_curated
Displaying 19 items

View Taxonomy