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ERMZT840_2_curated_scaffold_411

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Displaying items 1-30 of 141 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_411_1
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(144..674)
DNA (531bp) protein (177aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=4835122 bin=GWC2_Syntrophobacterales_56_13 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
ERMZT840_2_curated_scaffold_411_2
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

756..2153
DNA (1398bp) protein (466aa)
Fis family two component sigma-54 specific transcriptional regulator id=12556394 bin=CNBR_ACIDO species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RBG_13_RIF03_48_7_curated
ERMZT840_2_curated_scaffold_411_3
unknown

Not on your lists

comp(2159..2320)
DNA (162bp) protein (54aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_411_4
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2335..3078
DNA (744bp) protein (248aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain n=1 Tax=Clostridium sp. CAG:470 RepID=R7FLN4_9CLOT
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:CDE14647.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
hypothetical protein
ERMZT840_2_curated_scaffold_411_5
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(3071..4102)
DNA (1032bp) protein (344aa)
Mg-chelatase subunit ChlD n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFX2_CHLTF
Mg-chelatase subunit ChlD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
ERMZT840_2_curated_scaffold_411_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4224..4631)
DNA (408bp) protein (136aa)
ferredoxin n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626742
fdxB; 2Fe-2S ferredoxin
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
ERMZT840_2_curated_scaffold_411_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(4647..4928)
DNA (282bp) protein (94aa)
Peroxiredoxin-like bacterioferritin comigratory protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5B4_UNCMA
bcp-2; peroxiredoxin-like bacterioferritin comigratory protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMZT840_2_curated_scaffold_411_8
unknown

Not on your lists

comp(4977..5150)
DNA (174bp) protein (58aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_411_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(5166..5867)
DNA (702bp) protein (234aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363222F
ERMZT840_2_curated_scaffold_411_10
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(5869..6633)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F1E47
Multi-copper polyphenol oxidoreductase, laccase
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMZT840_2_curated_scaffold_411_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

6642..7019
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ACPS_SOLUE
acpS; 4'-phosphopantetheinyl transferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
ERMZT840_2_curated_scaffold_411_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6980..8278)
DNA (1299bp) protein (433aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD7_KORVE
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ABF40213.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
ERMZT840_2_curated_scaffold_411_13
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8280..8780)
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase id=1872484 bin=GWB2_Proteobacteria_55_19 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
phosphoribosylamine--glycine ligase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
ERMZT840_2_curated_scaffold_411_14
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(8777..10042)
DNA (1266bp) protein (422aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S2K6_DESTD
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
ERMZT840_2_curated_scaffold_411_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10039..10860)
DNA (822bp) protein (274aa)
TIGR00268 family protein {ECO:0000313|EMBL:CDM65458.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
asparagine synthase; K06864 uncharacterized protein id=12556770 bin=CNBR_ACIDO species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
ERMZT840_2_curated_scaffold_411_16
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

10962..11489
DNA (528bp) protein (176aa)
putative HNH endonuclease (EC:3.1.-.-)
Putative HNH endonuclease n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGT5_9BACT
Tax=GWA2_Nitrospirae_42_11_curated
ERMZT840_2_curated_scaffold_411_17
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

11523..11942
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NF64_DESAR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ERMZT840_2_curated_scaffold_411_18
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

12444..13361
DNA (918bp) protein (306aa)
Putative uncharacterized protein id=3650089 bin=GWA2_Ignavibacteriae_54_16_partial species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
hypothetical protein
Tax=GWA2_Ignavibacteria_54_16_curated
ERMZT840_2_curated_scaffold_411_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13368..13814
DNA (447bp) protein (149aa)
GatB/Yqey n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVJ1_KORVE
hypothetical protein
GatB/Yqey {ECO:0000313|EMBL:ABF39109.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
ERMZT840_2_curated_scaffold_411_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13815..14636
DNA (822bp) protein (274aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=24419127 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
lepB; signal peptidase I (EC:3.4.21.89)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMZT840_2_curated_scaffold_411_21
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

14664..15056
DNA (393bp) protein (131aa)
UTP-glucose-1-phosphate uridylyltransferase (EC:2.7.7.9)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Marinococcus halotolerans RepID=UPI0003B4EB8C
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
ERMZT840_2_curated_scaffold_411_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

15005..15496
DNA (492bp) protein (164aa)
UDP-glucose pyrophosphorylase (EC:2.7.7.9)
UTP-glucose-1-phosphate uridylyltransferase id=2062421 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMZT840_2_curated_scaffold_411_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15719..16534
DNA (816bp) protein (272aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribosomal RNA small subunit methyltransferase I id=1935631 bin=GWD2_Nitrospirae-related_57_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
uroporphyrin-III C/tetrapyrrole methyltransferase
ERMZT840_2_curated_scaffold_411_24

Not on your lists

comp(16479..16850)
DNA (372bp) protein (124aa)
CopY family transcriptional regulator n=1 Tax=Frankia sp. BCU110501 RepID=UPI00037089BC
CopY family transcriptional repressor {ECO:0000313|EMBL:AGT45853.1}; TaxID=1381396 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M1.;"
CopY family transcriptional regulator
ERMZT840_2_curated_scaffold_411_25
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16844..17101)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JD9_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD42211.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
ERMZT840_2_curated_scaffold_411_26
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(17129..18067)
DNA (939bp) protein (313aa)
peptidylprolyl cis-trans isomerase SurA (EC:5.2.1.8)
Peptidylprolyl cis-trans isomerase SurA, putative n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F537_ACIC5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ERMZT840_2_curated_scaffold_411_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18096..19397)
DNA (1302bp) protein (434aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Transcription-repair-coupling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
ERMZT840_2_curated_scaffold_411_28
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(19357..21423)
DNA (2067bp) protein (689aa)
transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Transcription-repair-coupling factor n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGS6_CHLTF
ERMZT840_2_curated_scaffold_411_29
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(21395..21697)
DNA (303bp) protein (101aa)
Bifunctional protein HldE id=3255082 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hldE; D-glycero-D-mannoheptose-7-phosphate kinase and D-glycero-D-mannoheptose-1-phosphate adenylyltransferase
Tax=RBG_16_Planctomycetes_59_8_curated
ERMZT840_2_curated_scaffold_411_30
unknown

Not on your lists

21776..22300
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 1-30 of 141 in total

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