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ERMZT840_2_curated_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_13_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..6024)
-----------------
DNA (6024bp)
protein (2008aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA15_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6055..7569
-----------------
DNA (1515bp)
protein (505aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA16_GEMAT
permease YjgP/YjgQ family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

7572..8732
-----------------
DNA (1161bp)
protein (387aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA17_GEMAT
permease YjgP/YjgQ family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8828..12229
-----------------
DNA (3402bp)
protein (1134aa)
Putative oar protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA21_GEMAT
putative oar protein
Putative oar protein {ECO:0000313|EMBL:BAH39619.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMZT840_2_curated_scaffold_13_5
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12290..13684)
-----------------
DNA (1395bp)
protein (465aa)
Amino acid transporter n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXX2_9DELT
Amino acid transporter {ECO:0000313|EMBL:EDM81710.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
putative permease
ERMZT840_2_curated_scaffold_13_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13729..14628
-----------------
DNA (900bp)
protein (300aa)
protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) (EC:2.5.1.-)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3N1_THERP
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_7
unknown

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comp(14629..15672)
-----------------
DNA (1044bp)
protein (348aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_13_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(15707..17083)
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MRI3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_13_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17106..18230)
-----------------
DNA (1125bp)
protein (375aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGU3_IGNAJ
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_13_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18242..22105)
-----------------
DNA (3864bp)
protein (1288aa)
Uncharacterized protein id=3975525 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_13_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(22173..25430)
-----------------
DNA (3258bp)
protein (1086aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium SCGC AAA298-D23 RepID=UPI00039D4CFC
TonB-dependent receptor
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_13_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(25657..26838)
-----------------
DNA (1182bp)
protein (394aa)
Putative M24 family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA28_GEMAT
peptidase M24
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26835..27416)
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA29_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_14
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

27490..28059
-----------------
DNA (570bp)
protein (190aa)
RNA polymerase sigma factor id=4650330 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
RNA polymerase sigma factor RpoE
Tax=BJP_IG2158_Zixibacteria_48_33
ERMZT840_2_curated_scaffold_13_15
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28056..28280
-----------------
DNA (225bp)
protein (75aa)
Mycothiol system anti-sigma-R factor n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XJB0_9PSEU
Mycothiol system anti-sigma-R factor {ECO:0000313|EMBL:EHR62920.1}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
anti-sigma factor
ERMZT840_2_curated_scaffold_13_16
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

28277..28885
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein id=24501137 bin=RBG_19FT_COMBO_GAL15_69_19 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Chloroflexi_64_43_curated
ERMZT840_2_curated_scaffold_13_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

28921..30033
-----------------
DNA (1113bp)
protein (371aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA31_GEMAT
monooxygenase FAD-binding protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

30030..30530
-----------------
DNA (501bp)
protein (167aa)
flavin reductase domain-containing protein id=14625818 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_13_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30530..30985
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA34_GEMAT
Polyketide cyclase/dehydrase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_13_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

30982..32235
-----------------
DNA (1254bp)
protein (418aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA35_GEMAT
3-oxoacyl-[acyl-carrier-protein] synthase 2
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_13_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

32268..32954
-----------------
DNA (687bp)
protein (229aa)
MIP family channel protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TBS8_9CHLR
MIP family channel protein {ECO:0000313|EMBL:EFH89860.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
tonoplast intrinsic protein (Aquaporin)
ERMZT840_2_curated_scaffold_13_22
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(32951..33925)
-----------------
DNA (975bp)
protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA37_GEMAT
ERMZT840_2_curated_scaffold_13_23
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(33922..34818)
-----------------
DNA (897bp)
protein (299aa)
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Porphobilinogen deaminase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R3S6_PIRSD
ERMZT840_2_curated_scaffold_13_24
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(34815..35627)
-----------------
DNA (813bp)
protein (271aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4R9_SPHTD
Tax=CG_Arma_01
ERMZT840_2_curated_scaffold_13_25
unknown

Not on your lists

35637..36233
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_13_26
unknown

Not on your lists

comp(36195..36317)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_13_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(36310..36990)
-----------------
DNA (681bp)
protein (227aa)
Heme exporter protein CcmC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA41_GEMAT
cytochrome c assembly protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_13_28
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(36987..37673)
-----------------
DNA (687bp)
protein (229aa)
Heme exporter protein CcmB n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA42_GEMAT
cytochrome c-type biogenesis protein CcmB
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_13_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(37660..38316)
-----------------
DNA (657bp)
protein (219aa)
ccmA; putative heme exporter protein CcmA (EC:3.6.3.41)
heme exporter protein CcmA id=24489893 bin=RBG_19FT_COMBO_GAL15_69_19 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_13_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(38303..38659)
-----------------
DNA (357bp)
protein (119aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1V3_DESTA id=5223401 bin=16ft_combo_ws3_JS1 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
two component sigma-54 specific Fis family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 112 in total

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