ggKbase home page

ERMZT840_2_curated_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 76 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_36_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..3151)
DNA (3150bp) protein (1050aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI000369D84C
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG93481.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_36_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3267..3944)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036A4602
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
ERMZT840_2_curated_scaffold_36_3
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4101..4631
DNA (531bp) protein (177aa)
Uncharacterized peroxidase-related enzyme n=1 Tax=Afipia sp. 1NLS2 RepID=D6V546_9BRAD
Uncharacterized peroxidase-related enzyme {ECO:0000313|EMBL:EFI53076.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative carboxymuconolactone decarboxylase
ERMZT840_2_curated_scaffold_36_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4628..5527
DNA (900bp) protein (300aa)
UPI0003D010B9 related cluster n=1 Tax=unknown RepID=UPI0003D010B9
ChrB protein {ECO:0000313|EMBL:ESZ11256.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ChrB protein
ERMZT840_2_curated_scaffold_36_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5469..6089)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V0L2_ROSS1 id=5225171 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Surfeit locus 1 family protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_36_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6071..6310)
DNA (240bp) protein (80aa)
GIY-YIG nuclease family protein n=2 Tax=Oscillibacter RepID=U2S572_9FIRM
GIY-YIG nuclease family protein {ECO:0000313|EMBL:ERK63647.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
GIY-YIG catalytic domain-containing protein
ERMZT840_2_curated_scaffold_36_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

6344..7564
DNA (1221bp) protein (407aa)
Major facilitator superfamily MFS_1 id=3489012 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CBE68614.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ERMZT840_2_curated_scaffold_36_8

Not on your lists

comp(7539..7967)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000369FB1E
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
osmC; peroxiredoxin osmC
ERMZT840_2_curated_scaffold_36_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8079..8537
DNA (459bp) protein (153aa)
hypothetical protein id=24418765 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Glyoxalase-like domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_36_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8534..10435
DNA (1902bp) protein (634aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFJ6_CONWI
glucose-methanol-choline oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_36_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10447..12312
DNA (1866bp) protein (622aa)
Peptidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIK6_RHOMR
peptidase
Peptidase {ECO:0000313|EMBL:AHG89716.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_36_12
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(12372..13778)
DNA (1407bp) protein (469aa)
NAD(P) transhydrogenase subunit beta id=4381502 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
NAD(P) transhydrogenase subunit beta
Tax=RBG_16_Zixibacteria_53_22_curated
ERMZT840_2_curated_scaffold_36_13
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(13778..14056)
DNA (279bp) protein (93aa)
Nicotinamide nucleotide transhydrogenase, subunit alpha id=4913309 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
Tax=RBG_16_Zixibacteria_53_22_curated
ERMZT840_2_curated_scaffold_36_14
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(14053..15150)
DNA (1098bp) protein (366aa)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DA710
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:BAL59350.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
NAD/NADP transhydrogenase subunit alpha
ERMZT840_2_curated_scaffold_36_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15155..15634)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E8E7A
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_36_16
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15643..16560)
DNA (918bp) protein (306aa)
Uncharacterized protein id=2268157 bin=GWA2_Deltaproteo_65_63 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
ERMZT840_2_curated_scaffold_36_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16557..16952)
DNA (396bp) protein (132aa)
hypothetical protein id=14632419 bin=bin9_gal15 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin9_gal15 organism_group=GAL15
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_36_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16949..17530)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q6E7_9BACT id=5223510 bin=16ft_combo_ws3_JS1 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
diguanylate cyclase
Tax=RBG_16_Chloroflexi_63_12_curated
ERMZT840_2_curated_scaffold_36_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

17608..18099
DNA (492bp) protein (164aa)
DinB family protein id=1250026 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
DinB family protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_36_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18155..19201
DNA (1047bp) protein (349aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9K6_9PROT
methylated-DNA/protein-cysteine methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_36_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19198..21834)
DNA (2637bp) protein (879aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6I5_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMZT840_2_curated_scaffold_36_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21831..24299)
DNA (2469bp) protein (823aa)
Antirepressor regulating drug resistance protein n=2 Tax=Singulisphaera acidiphila RepID=L0DNH4_SINAD
peptidase M56 BlaR1
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG88998.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_36_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24301..24690)
DNA (390bp) protein (130aa)
Putative transcriptional regulator n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNX5_SINAD
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA30366.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ERMZT840_2_curated_scaffold_36_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(24778..25344)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WS8_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMZT840_2_curated_scaffold_36_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

25405..26868
DNA (1464bp) protein (488aa)
Beta-lactamase domain protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRS9_METTR
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_36_26
unknown

Not on your lists

comp(26877..28160)
DNA (1284bp) protein (428aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_36_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28147..30207)
DNA (2061bp) protein (687aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI5_RHOM4
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACY47178.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
ERMZT840_2_curated_scaffold_36_28
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30222..31217)
DNA (996bp) protein (332aa)
Putative transport protein n=1 Tax=Bordetella bronchiseptica Bbr77 RepID=K4TEW2_BORBO
transporter
D-stereospecific aminopeptidase {ECO:0000313|EMBL:KCV59828.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
ERMZT840_2_curated_scaffold_36_29
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(31229..32188)
DNA (960bp) protein (320aa)
peptidase M55, D-aminopeptidase id=24479389 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
D-aminopeptidase
Tax=RBG_13_Aminicenantes_59_9_curated
ERMZT840_2_curated_scaffold_36_30
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32214..32948)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TVY7_MARPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF03382.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
Displaying items 1-30 of 76 in total

View Taxonomy