ggKbase home page

ERMZT840_2_curated_scaffold_75

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_75_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(83..1597)
-----------------
DNA (1515bp)
protein (505aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1600..2778)
-----------------
DNA (1179bp)
protein (393aa)
UPF0272 protein Moth_2512 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Y2512_MOOTA id=5223158 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
UPF0272 protein
UPF0272 protein J421_3233 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_75_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2806..3960)
-----------------
DNA (1155bp)
protein (385aa)
Putative threonine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T1_GEMAT
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3957..5765)
-----------------
DNA (1809bp)
protein (603aa)
UvrABC system protein C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=UVRC_GEMAT
UvrABC system protein C
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5732..7267)
-----------------
DNA (1536bp)
protein (512aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S9_GEMAT
hypothetical protein
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMZT840_2_curated_scaffold_75_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7264..8697)
-----------------
DNA (1434bp)
protein (478aa)
UPF0747 protein n=2 Tax=Bacteria RepID=E7C456_9BACT
protein of unknown function UCP012535
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8694..9407)
-----------------
DNA (714bp)
protein (238aa)
Methyltransferase domain protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YI55_ANEAE
SAM-dependent methyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_75_8
BJP_IG2157_CP_49_12, Bacteria

Not on your lists

comp(9404..9826)
-----------------
DNA (423bp)
protein (141aa)
Protein AMDU3_IPLC00004G0392 n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LJN2_9EURY
hypothetical protein
Tax=BJP_IG2157_CP_49_12
ERMZT840_2_curated_scaffold_75_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9954..10379)
-----------------
DNA (426bp)
protein (142aa)
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RLMH_ANADF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10379..11668)
-----------------
DNA (1290bp)
protein (430aa)
Glutamate dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSQ3_GRAMM
Glu/Leu/Phe/Val dehydrogenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_75_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11665..12696)
-----------------
DNA (1032bp)
protein (344aa)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S5_GEMAT
Tetraacyldisaccharide 4'-kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12693..13310)
-----------------
DNA (618bp)
protein (206aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Bacteria RepID=E7C459_9BACT
protein of unknown function DUF374
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13307..14419)
-----------------
DNA (1113bp)
protein (371aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S3_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_75_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14416..15405)
-----------------
DNA (990bp)
protein (330aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S2_GEMAT
oxidoreductase domain protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AHG90760.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_75_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15402..16169)
-----------------
DNA (768bp)
protein (256aa)
lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S1_GEMAT
ERMZT840_2_curated_scaffold_75_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16166..17428)
-----------------
DNA (1263bp)
protein (421aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8S0_GEMAT
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
ERMZT840_2_curated_scaffold_75_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17439..18506)
-----------------
DNA (1068bp)
protein (356aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R9_GEMAT
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
ERMZT840_2_curated_scaffold_75_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18526..19077)
-----------------
DNA (552bp)
protein (184aa)
Putative uncharacterized protein n=1 Tax=uncultured Gemmatimonadales bacterium HF0500_22O06 RepID=E7C5E1_9BACT
outer membrane chaperone Skp (OmpH)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_75_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19114..21519)
-----------------
DNA (2406bp)
protein (802aa)
Bacterial surface antigen (D15) family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R7_GEMAT
outer membrane protein assembly complex, YaeT protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_75_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21516..23996)
-----------------
DNA (2481bp)
protein (827aa)
ATP-dependent Clp protease ATP-binding subunit ClpC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8R6_GEMAT
ATPase AAA-2 domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_75_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(24024..25094)
-----------------
DNA (1071bp)
protein (357aa)
ATP:guanido phosphotransferase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX57_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25094..25591)
-----------------
DNA (498bp)
protein (166aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX58_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25591..26292)
-----------------
DNA (702bp)
protein (234aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=uncultured bacterium W5-51b RepID=H9BX59_9BACT
ABC transporter related protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_24
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(26289..27629)
-----------------
DNA (1341bp)
protein (447aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium W5-51b RepID=H9BX60_9BACT
MacB-like periplasmic core domain protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_75_25

Not on your lists

comp(27626..29116)
-----------------
DNA (1491bp)
protein (497aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1130999 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-51b.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX61_9BACT
ERMZT840_2_curated_scaffold_75_26
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(29116..30216)
-----------------
DNA (1101bp)
protein (367aa)
Protein chain release factor B n=1 Tax=uncultured bacterium W5-51b RepID=H9BX62_9BACT
prfB; peptide chain release factor 2
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_75_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(30223..30471)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q9_GEMAT
MJ0042 family finger-like protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_75_28
unknown

Not on your lists

30573..30791
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_75_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(31096..32073)
-----------------
DNA (978bp)
protein (326aa)
Response regulator receiver modulated diguanylate cyclase n=1 Tax=uncultured bacterium W5-51b RepID=H9BX64_9BACT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_75_30
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(32137..32901)
-----------------
DNA (765bp)
protein (255aa)
integral membrane protein TerC id=24407481 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
TerC family membrane protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying items 1-30 of 56 in total

View Taxonomy