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ERMZT840_2_curated_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMZT840_2_curated_scaffold_122_1
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..191
-----------------
DNA (189bp)
protein (63aa)
Glucose/sorbosone dehydrogenase-like protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39ID7_BURS3
glucose / Sorbosone dehydrogenase family protein
L-sorbosone dehydrogenase, putative {ECO:0000313|EMBL:ABC39473.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
ERMZT840_2_curated_scaffold_122_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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181..975
-----------------
DNA (795bp)
protein (265aa)
Carboxymethylenebutenolidase n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SX32_PLAL2
carboxymethylenebutenolidase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMZT840_2_curated_scaffold_122_3
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(972..2303)
-----------------
DNA (1332bp)
protein (444aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F09CA9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF46686.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
ERMZT840_2_curated_scaffold_122_4
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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2326..3519
-----------------
DNA (1194bp)
protein (398aa)
Metallophosphoesterase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P5J6_9BACT
yaeI; serine/threonine protein phosphatase
Tax=RBG_13_Acidobacteria_68_16_curated
ERMZT840_2_curated_scaffold_122_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3506..4120)
-----------------
DNA (615bp)
protein (205aa)
Regulatory protein TetR n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W5P8_STRFA
regulatory protein TetR
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMZT840_2_curated_scaffold_122_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4185..5321
-----------------
DNA (1137bp)
protein (379aa)
Saccharopine dehydrogenase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHG89937.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_122_7
unknown

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comp(5315..6292)
-----------------
DNA (978bp)
protein (326aa)
hypothetical protein, partial n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B49455
ERMZT840_2_curated_scaffold_122_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(6448..7470)
-----------------
DNA (1023bp)
protein (341aa)
Putative asparaginase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_122_9
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

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7566..8282
-----------------
DNA (717bp)
protein (239aa)
Glycosyl transferase family 2 id=3847233 bin=GWC2_ACD39_50_8 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
family 2 glycosyl transferase
Tax=BJP_IG2102_ACD39_51_10
ERMZT840_2_curated_scaffold_122_10
unknown

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8282..8638
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_122_11
unknown

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8616..9464
-----------------
DNA (849bp)
protein (283aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_122_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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9464..10522
-----------------
DNA (1059bp)
protein (353aa)
Quinolinate phosphoribosyl transferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMZT840_2_curated_scaffold_122_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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10584..11543
-----------------
DNA (960bp)
protein (320aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4N9_GEMAT
ERMZT840_2_curated_scaffold_122_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11537..12316
-----------------
DNA (780bp)
protein (260aa)
Acetylglutamate kinase n=2 Tax=Chloroflexus RepID=ARGB_CHLAA
acetylglutamate kinase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_122_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12313..13491
-----------------
DNA (1179bp)
protein (393aa)
argD; acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P1_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_122_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13488..13970
-----------------
DNA (483bp)
protein (161aa)
putative acetyltransferase (EC:2.3.1.-)
Argininosuccinate lyase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=ARLY_ROSCS id=5225765 bin=16ft_combo_ws3_JS1 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_Gemmatimonadetes_66_8_curated
ERMZT840_2_curated_scaffold_122_17
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13981..14886)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0ATF1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ13953.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
phospholipase D
ERMZT840_2_curated_scaffold_122_18
unknown

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14914..15327
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

ERMZT840_2_curated_scaffold_122_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15336..16043)
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI0003757668
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35334.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
two component transcriptional regulator, LuxR family
ERMZT840_2_curated_scaffold_122_20
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16126..16551)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363006E
Response regulator receiver protein {ECO:0000313|EMBL:CCV15525.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
response regulator receiver protein
ERMZT840_2_curated_scaffold_122_21
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16548..18401)
-----------------
DNA (1854bp)
protein (618aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I379_9RHIZ
PAS/PAC sensor signal transduction histidine kinase
ERMZT840_2_curated_scaffold_122_22
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18581..19915
-----------------
DNA (1335bp)
protein (445aa)
epoxide hydrolase domain-containing protein (EC:3.3.2.9)
multidrug MFS transporter n=1 Tax=Bradyrhizobium japonicum RepID=UPI000361D026
Multidrug MFS transporter {ECO:0000313|EMBL:KGT75995.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
ERMZT840_2_curated_scaffold_122_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19968..20384
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBL1_9BRAD
Cupin {ECO:0000313|EMBL:KIC94185.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cupin
ERMZT840_2_curated_scaffold_122_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20395..21006
-----------------
DNA (612bp)
protein (204aa)
Putative soluble quinone reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q2_GEMAT
chrR; putative soluble quinone reductase
Putative soluble quinone reductase {ECO:0000313|EMBL:BAH39229.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
ERMZT840_2_curated_scaffold_122_25
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21003..22487
-----------------
DNA (1485bp)
protein (495aa)
aldehyde dehydrogenase (EC:1.2.1.8)
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABB13172.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ABB13172.1};; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
hypothetical protein n=1 Tax=Enterobacteriaceae bacterium LSJC7 RepID=UPI0003693AFA
ERMZT840_2_curated_scaffold_122_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22480..23109
-----------------
DNA (630bp)
protein (210aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C719_SPHTD
oxidoreductase molybdopterin binding protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:AHG92266.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_122_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23081..23857
-----------------
DNA (777bp)
protein (259aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C720_SPHTD
oxidoreductase FAD/NAD(P)-binding domain protein
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:AHG92265.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_122_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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23880..24170
-----------------
DNA (291bp)
protein (97aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TXN8_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92264.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMZT840_2_curated_scaffold_122_29

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24172..24708
-----------------
DNA (537bp)
protein (179aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=506522 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR5.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=uncultured bacterium BLR5 RepID=C0INU9_9BACT
Peptide methionine sulfoxide reductase msrA
ERMZT840_2_curated_scaffold_122_30
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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24720..25226
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein id=14426683 bin=bin1_lowGC species=Bacillus sp. WBUNB004 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Electron transfer DM13
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Displaying items 1-30 of 54 in total

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