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GCF_001950615_127

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_001950615_127_1
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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66..830
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MEX1_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC72610.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
hypothetical protein
GCF_001950615_127_2
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(871..1959)
DNA (1089bp) protein (363aa)
Putative heptosyltransferase I n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDB8_PARUW
Putative heptosyltransferase I {ECO:0000313|EMBL:KIC72609.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
waaC; heptosyltransferase I
GCF_001950615_127_3
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(1956..2855)
DNA (900bp) protein (300aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDB9_PARUW
hypothetical protein
GCF_001950615_127_4
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(2875..3903)
DNA (1029bp) protein (343aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=SYFA_PARUW
pheS; phenylalanine-tRNA ligase subunit alpha
GCF_001950615_127_5
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(4058..4414)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL20_PARUW
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
GCF_001950615_127_6
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists


comp(4584..4778)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RL35_PARUW
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
GCF_001950615_127_7
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(4829..5383)
DNA (555bp) protein (185aa)
Translation initiation factor IF-3 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDC3_PARUW
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_8
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5385..7148)
DNA (1764bp) protein (588aa)
Threonine--tRNA ligase {ECO:0000256|SAAS:SAAS00175022}; EC=6.1.1.3 {ECO:0000256|SAAS:SAAS00175022};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Putative threonine-tRNA ligase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDC4_PARUW
thrS; threonine-tRNA ligase
GCF_001950615_127_trna_1
unknown

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comp(7168..7241)
DNA (74bp)
transferRNA Val
GCF_001950615_127_9
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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8124..9461
DNA (1338bp) protein (446aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDC6_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23423.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_10
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

9496..10035
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDC7_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC72681.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
hypothetical protein
GCF_001950615_127_11
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(10469..12301)
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=UVRC_PARUW
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
uvrC; excinuclease ABC subunit C
GCF_001950615_127_12
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12313..12696)
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDC9_PARUW
Uncharacterized protein {ECO:0000313|EMBL:KIC72696.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
hypothetical protein
GCF_001950615_127_13
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(12915..13991)
DNA (1077bp) protein (359aa)
Probable dual-specificity RNA methyltransferase RlmN 2 {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N 2 {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_01849}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
Probable dual-specificity RNA methyltransferase RlmN 2 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RLMN2_PARUW
hypothetical protein
GCF_001950615_127_14
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

14248..14475
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD1_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23418.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_15
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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14762..17821
DNA (3060bp) protein (1020aa)
Glycine--tRNA ligase {ECO:0000256|SAAS:SAAS00104898}; EC=6.1.1.14 {ECO:0000256|SAAS:SAAS00104898};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Probable glycyl-tRNA synthetase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD2_PARUW
glyS; glycyl-tRNA synthetase
GCF_001950615_127_16
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(18652..19068)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD4_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23415.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_17
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19065..20843)
DNA (1779bp) protein (593aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
DNA primase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD5_PARUW
dnaG; DNA primase
GCF_001950615_127_18
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

21163..23328
DNA (2166bp) protein (722aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
Putative exodeoxyribonuclease V n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD6_PARUW
recD; exodeoxyribonuclease V
GCF_001950615_127_19
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

23328..24452
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD7_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23412.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_20
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

24449..25120
DNA (672bp) protein (224aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
Putative dihydrodipicolinate reductase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDD8_PARUW
dapB; dihydrodipicolinate reductase
GCF_001950615_127_21
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

25142..26044
DNA (903bp) protein (301aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000255|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000255|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000255|HAMAP-Rule:MF_00418};; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=DAPA_PARUW
dapA; dihydrodipicolinate synthase
GCF_001950615_127_22
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

26037..27272
DNA (1236bp) protein (412aa)
LL-diaminopimelate aminotransferase; Short=DAP-AT;; Short=DAP-aminotransferase;; Short=LL-DAP-aminotransferase;; EC=2.6.1.83;; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
LL-diaminopimelate aminotransferase n=2 Tax=Candidatus Protochlamydia amoebophila RepID=DAPAT_PARUW
aspC; L,L-diaminopimelate aminotransferase
GCF_001950615_127_23
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

27942..28100
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC72798.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
GCF_001950615_127_24
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

28261..28857
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDE1_PARUW
hypothetical protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_25
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

28889..29488
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDE2_PARUW
hypothetical protein
UPF0056 inner membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_26
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

29503..30249
DNA (747bp) protein (249aa)
tRNA pseudouridine synthase A 2 {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I 2 {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I 2 {ECO:0000255|HAMAP-Rule:MF_00171}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
tRNA pseudouridine synthase A 2 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=TRUA2_PARUW
truA; tRNA-pseudouridine synthase I
GCF_001950615_127_27
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(30288..31454)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDE4_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23405.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_28
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(31454..31897)
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MDE5_PARUW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAF23404.1}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
GCF_001950615_127_29
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

32115..33038
DNA (924bp) protein (308aa)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
rnhB; ribonuclease HIII (EC:3.1.26.4)
Ribonuclease HIII n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RNH3_PARUW
Displaying items 1-30 of 34 in total

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