ggKbase home page

GCF_900106795_22

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_900106795_22_1

Not on your lists

comp(14..280)
DNA (267bp) protein (89aa)
Transposase IS3/IS911 family protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XCK9_CELAD
Uncharacterized protein {ECO:0000313|EMBL:KKM75381.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase is3/is911 family protein
GCF_900106795_22_2
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

599..1075
DNA (477bp) protein (159aa)
Small heat shock protein C2 n=1 Tax=Lepeophtheirus salmonis RepID=D3PGG6_LEPSM
Heat shock protein Hsp20 {ECO:0000313|EMBL:KGL63439.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
heat-shock protein
GCF_900106795_22_3
Formosa agariphila, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1178..1408
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KM42_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CDF79528.1}; TaxID=1347342 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa agariphila KMM 3901.;"
GCF_900106795_22_4
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1453..1938
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KNG0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGL63440.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
hypothetical protein
GCF_900106795_22_5
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1997..2737)
DNA (741bp) protein (247aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YV12_AEQSU
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:KJJ39642.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
GCF_900106795_22_6
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2812..3780
DNA (969bp) protein (323aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:AFL80831.1}; EC=6.1.1.2 {ECO:0000313|EMBL:AFL80831.1};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
Tryptophanyl-tRNA synthetase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YV13_AEQSU
GCF_900106795_22_7
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3840..5081)
DNA (1242bp) protein (414aa)
Membrane-bound metallopeptidase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU10_AEQSU
Peptidase M23 {ECO:0000313|EMBL:KJJ39647.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
membrane-bound metallopeptidase
GCF_900106795_22_8
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5086..5928)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU11_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39648.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_22_9
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5931..7328)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU12_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL80480.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_10
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7366..8364)
DNA (999bp) protein (333aa)
dTDP-glucose pyrophosphorylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU13_AEQSU
dTDP-glucose pyrophosphorylase
dTDP-glucose pyrophosphorylase {ECO:0000313|EMBL:AFL80481.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_11
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8585..9019)
DNA (435bp) protein (145aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU14_AEQSU
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
GCF_900106795_22_12
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9025..10479)
DNA (1455bp) protein (485aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU16_AEQSU
membrane protein
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AFL80484.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_13
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10818..11588
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU61_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL80529.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_14
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11666..12934)
DNA (1269bp) protein (423aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU60_AEQSU
Seryl-tRNA synthetase {ECO:0000313|EMBL:KJJ39673.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
GCF_900106795_22_15
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13075..14412)
DNA (1338bp) protein (446aa)
Vitamin K-dependent gamma-carboxylase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU59_AEQSU
HTTM domain-containing protein {ECO:0000313|EMBL:KJJ39670.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Vitamin K-dependent gamma-carboxylase
GCF_900106795_22_16
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14405..15337)
DNA (933bp) protein (311aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Riboflavin kinase/FMN adenylyltransferase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU58_AEQSU
riboflavin kinase/FMN adenylyltransferase
GCF_900106795_22_17
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15340..15972)
DNA (633bp) protein (211aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
Peptidyl-tRNA hydrolase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU57_AEQSU
GCF_900106795_22_18
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(16103..16723)
DNA (621bp) protein (207aa)
50S ribosomal protein L25 n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU56_AEQSU
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_19
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16993..17931)
DNA (939bp) protein (313aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KJJ39666.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KJJ39666.1};; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU55_AEQSU
ribose-phosphate pyrophosphokinase
GCF_900106795_22_trna_1
unknown

Not on your lists

18055..18136
DNA (82bp)
transferRNA Leu
GCF_900106795_22_20
CG_Flavo_01, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18098..18439
DNA (342bp) protein (114aa)
endonuclease n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037EB249
excinuclease ABC subunit C domain-containing protein
Tax=CG_Flavo_01
GCF_900106795_22_21
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18873..19307
DNA (435bp) protein (145aa)
Deoxycytidylate deaminase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU28_AEQSU
CMP deaminase {ECO:0000313|EMBL:KJJ39664.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
deoxycytidylate deaminase
GCF_900106795_22_22
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19307..20932
DNA (1626bp) protein (542aa)
C-terminal processing peptidase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU27_AEQSU
Peptidase S41 {ECO:0000313|EMBL:KJJ39663.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
C-terminal processing peptidase
GCF_900106795_22_23
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20938..21135)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU26_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39662.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_22_24
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21232..21813)
DNA (582bp) protein (194aa)
Putative transmembrane protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ELX3_9BACT
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
transmembrane protein
GCF_900106795_22_25
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21936..22499
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU24_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39661.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_22_26
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22595..23197
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU23_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39660.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_22_27
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23336..25117
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU21_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ40089.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_22_28
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25123..25464
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU20_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL80488.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_22_29
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


25488..26327
DNA (840bp) protein (280aa)
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YU19_AEQSU
Displaying items 1-30 of 89 in total

View Taxonomy