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GCF_900106795_26

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_900106795_26_1
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..213
DNA (213bp) protein (71aa)
Integrase core domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2ECN0_9FLAO
Integrase core domain protein {ECO:0000313|EMBL:EGV43810.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
integrase
GCF_900106795_26_2
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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443..832
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRS6_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39051.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_26_3
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1091..2395
DNA (1305bp) protein (435aa)
Outer membrane protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRS2_AEQSU
Transporter {ECO:0000313|EMBL:KJJ39050.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
outer membrane protein
GCF_900106795_26_4
unknown

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comp(2402..2587)
DNA (186bp) protein (62aa)

This feature has no annotations

GCF_900106795_26_5
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2594..3673
DNA (1080bp) protein (360aa)
RND family efflux transporter, MFP subunit n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRS1_AEQSU
RND transporter {ECO:0000313|EMBL:KJJ39049.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
RND family efflux transporter, MFP subunit
GCF_900106795_26_6
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3765..6977
DNA (3213bp) protein (1071aa)
Cation/multidrug efflux pump n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRS0_AEQSU
Cation/multidrug efflux pump {ECO:0000313|EMBL:AFL79688.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
cation/multidrug efflux pump
GCF_900106795_26_7
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7056..7361
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AQS6_MARSH
Uncharacterized protein {ECO:0000313|EMBL:KJJ39047.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_26_8
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7543..7749
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR9_AEQSU
Sulfurtransferase {ECO:0000313|EMBL:KJJ39046.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_26_9
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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7932..8231
DNA (300bp) protein (100aa)
Ribosomal subunit interface protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR8_AEQSU
30S ribosomal protein S30 {ECO:0000313|EMBL:KJJ39045.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
ribosomal subunit interface protein
GCF_900106795_26_10
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8244..9080
DNA (837bp) protein (279aa)
Universal stress protein UspA-like protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR7_AEQSU
Universal stress protein UspA {ECO:0000313|EMBL:KJJ39044.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
universal stress protein UspA-like protein
GCF_900106795_26_11
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9269..9967)
DNA (699bp) protein (233aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Purine-nucleoside phosphorylase, DeoD family n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR6_AEQSU
purine-nucleoside phosphorylase, DeoD family
GCF_900106795_26_12
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9951..10625)
DNA (675bp) protein (225aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
Deoxyribose-phosphate aldolase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR5_AEQSU
deoxyribose-phosphate aldolase
GCF_900106795_26_13
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10588..10920)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR4_AEQSU
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_26_14
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10975..11841)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR3_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39040.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_26_15
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11916..12320)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR2_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KJJ39039.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
hypothetical protein
GCF_900106795_26_16
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12432..13664
DNA (1233bp) protein (411aa)
PAS/PAC sensor signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR1_AEQSU
GCF_900106795_26_17
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13669..14712
DNA (1044bp) protein (348aa)
cAMP-binding protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRR0_AEQSU
Transcriptional regulator {ECO:0000313|EMBL:KJJ39038.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
cAMP-binding protein
GCF_900106795_26_18
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14971..15810
DNA (840bp) protein (280aa)
Universal stress protein UspA-like protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YRQ9_AEQSU
universal stress protein UspA-like protein
Universal stress protein UspA-like protein {ECO:0000313|EMBL:AFL79677.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_900106795_26_19
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(15906..16187)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VVM1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPR74141.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
helix-turn-helix, Psq domain protein
GCF_900106795_26_20
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16436..17155
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBP8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:GAL82199.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
conserved exported protein of unknown function
GCF_900106795_26_21
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17233..18096
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037E6E38
Uncharacterized protein {ECO:0000313|EMBL:KJJ37963.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
AraC family transcriptional regulator
GCF_900106795_26_22
Psychroflexus gondwanensis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18237..18698)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Psychroflexus gondwanensis ACAM 44 RepID=N1WVE8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EMY79833.1}; TaxID=1189619 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychroflexus gondwanensis ACAM 44.;"
hypothetical protein
GCF_900106795_26_23
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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18922..19977
DNA (1056bp) protein (352aa)
Mobile element protein n=1 Tax=Formosa sp. AK20 RepID=M7MJV8_9FLAO
Mobile element protein {ECO:0000313|EMBL:KJJ37958.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
transposase
GCF_900106795_26_24

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20129..20347
DNA (219bp) protein (73aa)
Transposase IS3/IS911 family protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XCK9_CELAD
Uncharacterized protein {ECO:0000313|EMBL:KKM75381.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase is3/is911 family protein
Displaying 24 items

View Taxonomy