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GCF_900000175_25

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Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_900000175_25_1
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(837..2000)
DNA (1164bp) protein (388aa)
Response regulator receiver domain and a sigma factor phosphatase domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXY9_SYNAS
response regulator receiver domain-containing protein
Response regulator receiver domain and a sigma factor phosphatase domain {ECO:0000313|EMBL:ABC78953.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
GCF_900000175_25_2
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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2111..2575
DNA (465bp) protein (155aa)
CheW2: chemotaxis protein CheW id=3113768 bin=GWF2_Bacteroidetes_40_13 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
chemotaxis signal transduction protein
Tax=GWE2_Bacteroidetes_40_63_curated
GCF_900000175_25_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2584..4116
DNA (1533bp) protein (511aa)
MCP methyltransferase, CheR-type with Tpr repeats {ECO:0000313|EMBL:EDY15985.1}; EC=2.1.1.80 {ECO:0000313|EMBL:EDY15985.1};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type with Tpr repeats n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC63_9BACT
GCF_900000175_25_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4103..4627
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI000379E240
cheW40H-5; scaffold protein CheW associated with MCPs of class 40H
Scaffold protein CheW associated with MCPs of class 40H {ECO:0000313|EMBL:ABB32926.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
GCF_900000175_25_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4620..6983
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00037A5B88
chemotaxis protein histidine kinase-like protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
GCF_900000175_25_6
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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7076..8818
DNA (1743bp) protein (581aa)
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDR33174.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Methyl-accepting chemotaxis sensory transducer id=3905781 bin=GWF2_Melioribacter_38_21 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
methyl-accepting chemotaxis protein
GCF_900000175_25_7
BJP_IG2158_Anaerolineales_38_74, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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8821..9879
DNA (1059bp) protein (353aa)
response regulator receiver (CheY-like protein) modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase id=4399278 bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=BJP_IG2158_Anaerolineales_38_74
GCF_900000175_25_8
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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9978..11216
DNA (1239bp) protein (413aa)
Signal transduction histidine kinase {ECO:0000313|EMBL:CDR33172.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Response regulator receiver sensor signal transduction histidine kinase id=3809930 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
response regulator receiver sensor signal transduction histidine kinase
GCF_900000175_25_9
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(11360..11941)
DNA (582bp) protein (194aa)
Riboflavin biosynthesis protein ribF {ECO:0000313|EMBL:CDR34015.1}; EC=2.7.7.2 {ECO:0000313|EMBL:CDR34015.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8X2_AMMDK
riboflavin biosynthesis protein RibF
GCF_900000175_25_10
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(12149..12910)
DNA (762bp) protein (254aa)
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=264201 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Protochlamydia amoebophila (strain UWE25).;"
tRNA pseudouridine synthase B n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=TRUB_PARUW
truB; tRNA pseudouridine synthase B
GCF_900000175_25_11
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(12876..13247)
DNA (372bp) protein (124aa)
Ribosome-binding factor A n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) RepID=F8L9T5_SIMNZ
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
rbfA; ribosome-binding factor A
GCF_900000175_25_12
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(13369..16122)
DNA (2754bp) protein (918aa)
Translation initiation factor IF-2 n=2 Tax=Parachlamydia acanthamoebae RepID=F8L0Z1_PARAV
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
infB; translation initiation factor IF-2
GCF_900000175_25_13
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(16126..17400)
DNA (1275bp) protein (425aa)
Transcription elongation protein nusA n=2 Tax=Waddlia chondrophila RepID=D6YVR4_WADCW
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
nusA; Transcription elongation protein nusA
GCF_900000175_25_14
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(18014..19720)
DNA (1707bp) protein (569aa)
30S ribosomal protein S1 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MD61_PARUW
30S ribosomal protein S1 {ECO:0000313|EMBL:CDR35083.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
rpsA; 30S ribosomal protein S1
GCF_900000175_25_15
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(20083..20451)
DNA (369bp) protein (123aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
ptpS; 6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12)
Putative 6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) RepID=D6YVR6_WADCW
GCF_900000175_25_16
Waddlia chondrophila, Waddlia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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21322..22179
DNA (858bp) protein (286aa)
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=716544 species="Bacteria; Chlamydiae; Chlamydiales; Waddliaceae; Waddlia.;" source="Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044).;"
Aspartokinase n=2 Tax=Waddlia chondrophila RepID=D6YVR7_WADCW
GCF_900000175_25_17
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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22370..24355
DNA (1986bp) protein (662aa)
Uncharacterized protein n=2 Tax=Waddlia chondrophila RepID=D6YVR8_WADCW
Uncharacterized protein {ECO:0000313|EMBL:CDR35079.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
hypothetical protein
GCF_900000175_25_18
Candidatus Babela massiliensis, Candidatus Babela, Deltaproteobacteria, Proteobacteria, Bacteria

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24507..25895
DNA (1389bp) protein (463aa)
Beta-glucosidase family enzyme n=1 Tax=delta proteobacterium BABL1 RepID=V6DJG7_9DELT
bglB; Beta-glucosidase family enzyme
Beta-glucosidase family enzyme {ECO:0000313|EMBL:CDK31018.1}; TaxID=673862 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Babela.;" source="Candidatus Babela massiliensis.;"
GCF_900000175_25_19
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(26013..27200)
DNA (1188bp) protein (396aa)
Putative branched-chain amino acid transport system II carrier protein n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MD58_PARUW
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CDR35076.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
braB; branched-chain amino acid transport system II carrier protein
GCF_900000175_25_20
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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27559..28794
DNA (1236bp) protein (412aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Parachlamydia acanthamoebae (strain UV7) RepID=F8KYA1_PARAV
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
GCF_900000175_25_21
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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28803..30131
DNA (1329bp) protein (443aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=MURD_PARUW
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase murD
GCF_900000175_25_22
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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30146..30874
DNA (729bp) protein (243aa)
Putative muramidase {ECO:0000313|EMBL:CDR35073.1}; EC=3.2.1.- {ECO:0000313|EMBL:CDR35073.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Putative muropeptidase (Autolysin) n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=Q6MBS5_PARUW
lytF; muropeptidase (autolysin)
GCF_900000175_25_23
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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30889..32037
DNA (1149bp) protein (383aa)
Septum-peptidoglycan biosynthetic protein n=2 Tax=Waddlia chondrophila RepID=D6YRP3_WADCW
Septum-peptidoglycan biosynthetic protein {ECO:0000313|EMBL:CDR35072.1}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
ftsW; septum-peptidoglycan biosynthetic protein
GCF_900000175_25_24
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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32034..34451
DNA (2418bp) protein (806aa)
Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2F6J1_TRIVA
Putative uncharacterized protein {ECO:0000313|EMBL:EAX99489.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
GCF_900000175_25_25
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(34563..35477)
DNA (915bp) protein (305aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
Methionine aminopeptidase n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4Z1_9CHLA
map; methionine aminopeptidase
GCF_900000175_25_26
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(35649..36434)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQH0_9BACT
yaeC; ABC transporter substrate binding protein yaeC
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
GCF_900000175_25_27
Candidatus Protochlamydia amoebophila, Candidatus Protochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(36427..37110)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EEX4_9BACT
Putative D-methionine transport system permease protein MetI {ECO:0000313|EMBL:KIC73397.1}; TaxID=362787 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Candidatus Protochlamydia.;" source="Candidatus Protochlamydia amoebophila.;"
yaeE; ABC transporter permease
GCF_900000175_25_28
R_Chlamydiae_45_22, Chlamydiia, Chlamydiae, Bacteria

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comp(37100..38152)
DNA (1053bp) protein (351aa)
Phosphonate-transporting ATPase id=4883471 bin=GWC2_Chlamydiae_50_10 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chlamydiae_50_10 organism_group=Chlamydiae organism_desc=Good +
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Chlamydiae_45_22_curated
GCF_900000175_25_29
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

38538..40139
DNA (1602bp) protein (534aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
pgi; Glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=2 Tax=Waddlia chondrophila RepID=D6YVD2_WADCW
GCF_900000175_25_30
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

40393..41517
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia.;" source="Criblamydia sequanensis.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KZE4_PARAV
murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2
Displaying items 1-30 of 55 in total

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