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GCF_000373245_4

Search features with annotation key words

Displaying items 1-30 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_000373245_4_1
unknown

Not on your lists

1..336
DNA (336bp) protein (112aa)
hypothetical protein, partial n=1 Tax=Echinicola pacifica RepID=UPI000379E462
GCF_000373245_4_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(454..828)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035EE20A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA76470.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_3
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(833..2239)
DNA (1407bp) protein (469aa)
RNA methyltransferase n=1 Tax=Echinicola pacifica RepID=UPI000380543F
23S rRNA (uracil-5-)-methyltransferase RumA
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:AGA76469.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_4
unknown

Not on your lists

2418..2621
DNA (204bp) protein (68aa)

This feature has no annotations

GCF_000373245_4_5
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2625..3437
DNA (813bp) protein (271aa)
short-chain dehydrogenase n=1 Tax=Echinicola pacifica RepID=UPI000377B4B9
short-chain dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA76468.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_6
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3444..7424
DNA (3981bp) protein (1327aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000373DE4B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA76467.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_7
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7484..7966)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037F4971
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA76466.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_8
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(7956..9407)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000365061A
PSP1-like protein
Putative PSP1-like protein {ECO:0000313|EMBL:AGA76465.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9470..10759)
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036E6F32
phosphoribosylamine--glycine ligase
GCF_000373245_4_10
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10777..12954)
DNA (2178bp) protein (726aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Echinicola pacifica RepID=UPI00036660EE
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:AGA76463.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13055..14023
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003761DDD
KpsF/GutQ family protein
KpsF/GutQ family protein {ECO:0000313|EMBL:AGA76462.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_12
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14031..15101
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000366A2FE
mannose-1-phosphate guanylyltransferase
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:AGA76461.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_13
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15134..15631)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003811E19
redox protein, regulator of disulfide bond formation
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:AGA76460.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_14
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16119..17204)
DNA (1086bp) protein (362aa)
malate dehydrogenase n=1 Tax=Echinicola pacifica RepID=UPI0003645F84
malate/lactate dehydrogenase
Malate/lactate dehydrogenase {ECO:0000313|EMBL:AGA76459.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_15
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17293..18258)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035FF190
exopolyphosphatase
Exopolyphosphatase {ECO:0000313|EMBL:AGA76458.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_16
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18464..20047
DNA (1584bp) protein (528aa)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Echinicola pacifica RepID=UPI000375DB90
acetyl-CoA carboxylase, carboxyl transferase subunit alpha
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:AGA76457.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_17
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

20384..21454
DNA (1071bp) protein (357aa)
peptidase M42 n=1 Tax=Echinicola pacifica RepID=UPI00037BD00E
peptidase family protein
Peptidase family protein {ECO:0000313|EMBL:AGA76456.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_18
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21724..22893
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037C4F5C
phosphosugar isomerase
Putative phosphosugar isomerase {ECO:0000313|EMBL:AGA76455.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_19
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22900..23823
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003730C92
hexose kinase
Hexose kinase, 1-phosphofructokinase family {ECO:0000313|EMBL:AGA76454.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_20
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23816..24760
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000362A24D
sugar kinase
Sugar kinase, ribokinase {ECO:0000313|EMBL:AGA76453.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_21
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24770..25594
DNA (825bp) protein (275aa)
ketose-bisphosphate aldolase n=1 Tax=Echinicola pacifica RepID=UPI000380ADC7
ketose-bisphosphate aldolase
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:AGA76452.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_22
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25602..26588
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003628D17
TIM-barrel fold metal-dependent hydrolase
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:AGA76451.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_23
unknown

Not on your lists

26617..26712
DNA (96bp) protein (32aa)

This feature has no annotations

GCF_000373245_4_24
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26756..28165
DNA (1410bp) protein (470aa)
glycosyl hydrolase family 109 n=1 Tax=Echinicola pacifica RepID=UPI00036209CC
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA76450.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_4_25
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29010..29705
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003711978
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEV33181.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
GCF_000373245_4_26
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29922..33071
DNA (3150bp) protein (1050aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003605C8F
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EFS29941.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
TonB-dependent receptor plug
GCF_000373245_4_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33083..34543
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000361C8C0
Uncharacterized protein {ECO:0000313|EMBL:EIY65040.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
RagB/SusD domain-containing protein
GCF_000373245_4_28
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34903..37176
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036250FF
heparinase
Heparinase {ECO:0000313|EMBL:AIZ43554.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
GCF_000373245_4_29
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37173..39383
DNA (2211bp) protein (737aa)
Poly(beta-D-mannuronate) lyase (EC:4.2.2.3)
Poly(Beta-D-mannuronate) lyase {ECO:0000313|EMBL:ABI72940.1}; EC=4.2.2.3 {ECO:0000313|EMBL:ABI72940.1};; Flags: Precursor;; TaxID=318167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella frigidimarina (strain NCIMB 400).;"
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036C149B
GCF_000373245_4_30
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39393..41504
DNA (2112bp) protein (704aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000382648B
alg17A; putative alginate lyase
Putative alginate lyase {ECO:0000313|EMBL:ABD82539.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
Displaying items 1-30 of 119 in total

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