ggKbase home page

GCF_000373245_5

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_000373245_5_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1..357)
DNA (357bp) protein (119aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYC8_ECHVK
outer membrane protein/peptidoglycan-associated (lipo)protein
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:AGA77766.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_2
Winogradskyella sp. PG-2, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(646..24324)
DNA (23679bp) protein (7893aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000377E02D
internalin, putative
Internalin, putative {ECO:0000313|EMBL:BAO76682.1}; TaxID=754409 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella sp. PG-2.;"
GCF_000373245_5_3
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24389..25369)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000370FB15
membrane protein
Bacteroidetes-specific putative membrane protein {ECO:0000313|EMBL:AGA79880.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_4
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25375..44202)
DNA (18828bp) protein (6276aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037EB1CE
transcriptional regulator, AraC family with Parallel beta-helix repeat
Transcriptional regulator, AraC family with Parallel beta-helix repeat {ECO:0000313|EMBL:EAP87090.2}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
GCF_000373245_5_5
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(44147..46486)
DNA (2340bp) protein (780aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000377B6EC
Uncharacterized protein {ECO:0000313|EMBL:EIJ39061.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
outer membrane adhesin-like protein
GCF_000373245_5_6
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(47650..48873)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003646D7C
Putative type I phosphodiesterase / nucleotide pyrophosphatase family protein {ECO:0000313|EMBL:EAZ81857.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
type I phosphodiesterase/nucleotide pyrophosphatase
GCF_000373245_5_7
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(48955..50754)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037BC240
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:EAZ81856.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
RagB/SusD domain-containing protein
GCF_000373245_5_8
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(50774..54010)
DNA (3237bp) protein (1079aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036AD6ED
Membrane protein {ECO:0000313|EMBL:EAZ81855.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
TonB-dependent receptor plug
GCF_000373245_5_9
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

54657..55241
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036ABA77
Uncharacterized protein {ECO:0000313|EMBL:EAZ81852.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
TetR family transcriptional regulator
GCF_000373245_5_10
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55220..55471)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037371A1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWH13836.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
GCF_000373245_5_11
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(55526..56872)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000377C595
Uncharacterized protein {ECO:0000313|EMBL:EIJ39596.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
GCF_000373245_5_12
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(56859..58553)
DNA (1695bp) protein (565aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003763A6F
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EIJ39597.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
Mg-chelatase subunit ChlD
GCF_000373245_5_13
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(58546..59553)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037BD0AC
von Willebrand factor type A-like protein
von Willebrand factor type A-like protein {ECO:0000313|EMBL:AGA80758.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_14
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(59543..60043)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037FCD55
Uncharacterized protein {ECO:0000313|EMBL:EIJ39599.1}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
GCF_000373245_5_15
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(60040..60972)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000374028E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31069.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
GCF_000373245_5_16
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(60983..61966)
DNA (984bp) protein (328aa)
ATPase AAA n=1 Tax=Echinicola pacifica RepID=UPI00036BA074
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:AGA80761.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_17
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62010..63041)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037A5B4C
Uncharacterized protein {ECO:0000313|EMBL:ESU26519.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
nonspecific acid phosphatase precursor
GCF_000373245_5_18
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(63123..64598)
DNA (1476bp) protein (492aa)
arylsulfatase n=1 Tax=Echinicola pacifica RepID=UPI000366C410
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AEV31065.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
GCF_000373245_5_19
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(64927..66480)
DNA (1554bp) protein (518aa)
arylsulfatase n=1 Tax=Echinicola pacifica RepID=UPI0003751773
Sulfatase family protein {ECO:0000313|EMBL:EAZ81863.2}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
arylsulfatase
GCF_000373245_5_20
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(66682..67146)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035C6B3A
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AGA80764.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_21
unknown

Not on your lists

comp(67283..67615)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035D237C
GCF_000373245_5_22
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(67944..69326)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036E27BF
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AGA80766.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_23
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(69500..70708)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000371C040
phosphate-selective porin
Phosphate-selective porin {ECO:0000313|EMBL:AGA80768.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_24
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

71448..72377
DNA (930bp) protein (310aa)
ribose-phosphate pyrophosphokinase n=1 Tax=Echinicola pacifica RepID=UPI000376C901
ribose-phosphate pyrophosphokinase
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:AGA80769.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_25
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


72418..73005
DNA (588bp) protein (196aa)
50S ribosomal protein L25 n=1 Tax=Echinicola pacifica RepID=UPI00035CFEBB
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_26
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

73099..73659
DNA (561bp) protein (187aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
peptidyl-tRNA hydrolase n=1 Tax=Echinicola pacifica RepID=UPI000382673C
peptidyl-tRNA hydrolase
GCF_000373245_5_27
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

73728..74024
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000369C4F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80772.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_28
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

74351..75607
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036805B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA80773.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_29
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

75621..78068
DNA (2448bp) protein (816aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003789300
outer membrane protein/peptidoglycan-associated (lipo)protein
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:AGA80774.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_5_30
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(78179..79579)
DNA (1401bp) protein (467aa)
ATPase AAA n=1 Tax=Echinicola pacifica RepID=UPI00037E0996
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AGA80775.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Displaying items 1-30 of 47 in total

View Taxonomy