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GCF_000373245_13

Search features with annotation key words

Displaying items 1-30 of 610 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_000373245_13_1
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..699
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTD3_AEQSU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL80251.1}; Flags: Precursor;; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
GCF_000373245_13_2
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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825..1976
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037CB7E5
Uncharacterized protein {ECO:0000313|EMBL:GAE64248.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
putative hemagglutinin-related protein
GCF_000373245_13_trna_4
unknown

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comp(2472..2545)
DNA (74bp)
transferRNA Met
GCF_000373245_13_3
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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2966..3361
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037AE7F4
activator of Hsp90 ATPase 1-like protein
Activator of Hsp90 ATPase homolog 1-like protein {ECO:0000313|EMBL:AGA79651.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_4
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3445..5289
DNA (1845bp) protein (615aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037D96D1
permease
Putative permease {ECO:0000313|EMBL:AGA79652.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_5
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5362..5637
DNA (276bp) protein (92aa)
30S ribosomal protein S15 n=1 Tax=Echinicola pacifica RepID=UPI000374F77F
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_6
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5752..7893
DNA (2142bp) protein (714aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
polynucleotide phosphorylase n=1 Tax=Echinicola pacifica RepID=UPI00037E9651
polyribonucleotide nucleotidyltransferase
GCF_000373245_13_7
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7976..8839
DNA (864bp) protein (288aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G4A4_ECHVK
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA79655.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_8
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9262..10206
DNA (945bp) protein (315aa)
thioredoxin reductase n=1 Tax=Echinicola pacifica RepID=UPI00035FE9DA
thioredoxin-disulfide reductase
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:AGA79656.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10215..11243
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037F28D7
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AGA79657.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_10
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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11331..12047
DNA (717bp) protein (239aa)
GlcNAc-PI de-N-acetylase n=1 Tax=Echinicola pacifica RepID=UPI000369B8A2
bacillithiol biosynthesis deacetylase BshB1
Bacillithiol biosynthesis deacetylase BshB1 {ECO:0000313|EMBL:AGA79658.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12143..12775)
DNA (633bp) protein (211aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036A3B65
pyridoxamine-phosphate oxidase
GCF_000373245_13_12
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12872..13441
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000365C736
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AGA79660.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_13
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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13497..15359
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035D15E9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79661.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_trna_1
unknown

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15531..15603
DNA (73bp)
transferRNA Thr
GCF_000373245_13_trna_2
unknown

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15649..15721
DNA (73bp)
transferRNA Thr
GCF_000373245_13_14
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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16036..17025
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037E82FF
Uncharacterized protein {ECO:0000313|EMBL:EPR68148.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
hypothetical protein
GCF_000373245_13_15
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(17567..19006)
DNA (1440bp) protein (480aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000369CE99
long-chain fatty acid transport protein
Long-chain fatty acid transport protein {ECO:0000313|EMBL:AGA79662.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_16
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19143..19853)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036FAD46
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79663.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_17
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19933..20466
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003802A8C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79664.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_18
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20636..21409)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000376D1EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79666.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_19
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21585..24068)
DNA (2484bp) protein (828aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000361D8E6
ATP-dependent helicase HrpB
ATP-dependent helicase HrpB {ECO:0000313|EMBL:AGA79668.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_20
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24493..25011)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003685317
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA79669.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_21
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(25135..26346)
DNA (1212bp) protein (404aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
thiouridylase n=1 Tax=Echinicola pacifica RepID=UPI000376F806
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
GCF_000373245_13_22
unknown

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comp(26343..26462)
DNA (120bp) protein (40aa)

This feature has no annotations

GCF_000373245_13_23
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26648..27832
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037F71FA
N6-adenine-specific DNA methylase
Putative N6-adenine-specific DNA methylase {ECO:0000313|EMBL:AGA79832.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_24
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28010..29176)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003606827
cell wall-associated hydrolase
Cell wall-associated hydrolase, invasion-associated protein {ECO:0000313|EMBL:AGA79831.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_25
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29690..30991)
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036A1F89
amidohydrolase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGA79830.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_26
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(31029..32408)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036A2BF9
amidohydrolase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGA79829.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_13_27
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32424..34097)
DNA (1674bp) protein (558aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003765899
amidohydrolase
Amidohydrolase, imidazolonepropionase {ECO:0000313|EMBL:AGA79828.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Displaying items 1-30 of 610 in total

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