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GCF_000373245_23

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Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCF_000373245_23_1
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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1234..2385
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003676261
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:AGA76365.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_2
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2435..3553
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003726E8C
hypothetical protein
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:AGA76364.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_3
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3558..4163
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00035D7035
glycosyl transferase
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:AGA76363.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_4
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4602..6476
DNA (1875bp) protein (625aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000371D67A
nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AGA76362.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_5
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6588..7733
DNA (1146bp) protein (382aa)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:KEO74364.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KEO74364.1};; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
dnaX; DNA polymerase III subunits tau/gamma (EC:2.7.7.7)
DNA polymerase III subunit gamma/tau n=1 Tax=Echinicola pacifica RepID=UPI000372D01F
GCF_000373245_23_6
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7784..8305
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036B8499
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:EKB49294.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
GCF_000373245_23_7
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8302..9294)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003651020
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA76361.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_8
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9348..10910)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037293E2
LysM repeat-containing protein
LysM repeat-containing protein {ECO:0000313|EMBL:AGA76360.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10974..11618)
DNA (645bp) protein (215aa)
O-methyltransferase n=1 Tax=Echinicola pacifica RepID=UPI00037E7970
O-methyltransferase
Putative O-methyltransferase {ECO:0000313|EMBL:AGA76359.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_10
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11621..12850)
DNA (1230bp) protein (410aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000361EC8A
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGA76358.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_11
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13074..13910
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037AD41F
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AGA76357.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_12
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14002..15294
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000375C179
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AGA76356.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_13
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15405..17114)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003652F8A
carbohydrate-binding protein SusD
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:AIZ43552.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
GCF_000373245_23_14
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17127..20282)
DNA (3156bp) protein (1052aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037B33B5
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:GAF02151.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
TonB-dependent receptor plug
GCF_000373245_23_15
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20881..22977)
DNA (2097bp) protein (699aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003803681
hypothetical protein
Conserved hypothetical periplasmic protein {ECO:0000313|EMBL:CAZ97291.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
GCF_000373245_23_16
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23013..24482)
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037745D2
Uncharacterized protein {ECO:0000313|EMBL:GAL63556.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
GCF_000373245_23_17
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24495..25934)
DNA (1440bp) protein (480aa)
N-acetylgalactosamine-4-sulfatase (EC:3.1.6.12)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037D1210
N-acetylgalactosamine-4-sulfatase {ECO:0000313|EMBL:EWH15337.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
GCF_000373245_23_18
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25943..27949)
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000371DA0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ97287.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
GCF_000373245_23_19
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27946..29511)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036E884F
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ADV47769.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
GCF_000373245_23_20
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29566..31266)
DNA (1701bp) protein (567aa)
Choline-sulfatase {ECO:0000313|EMBL:GAL63557.1}; EC=3.1.6.6 {ECO:0000313|EMBL:GAL63557.1};; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
iduronate-2-sulfatase (EC:3.1.6.13)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003663B1F
GCF_000373245_23_21
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31600..32250)
DNA (651bp) protein (217aa)
2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.2.14)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:ADY29627.1}; EC=4.1.2.14 {ECO:0000313|EMBL:ADY29627.1};; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036DFA95
GCF_000373245_23_22
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32237..33190)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037A4DF9
2-keto-3-deoxy-galactonokinase
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:AIZ43540.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
GCF_000373245_23_23
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33191..34654)
DNA (1464bp) protein (488aa)
aldA; lactaldehyde dehydrogenase (EC:1.2.1.22)
Lactaldehyde dehydrogenase {ECO:0000313|EMBL:CAZ97294.1}; EC=1.2.1.22 {ECO:0000313|EMBL:CAZ97294.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037BD18F
GCF_000373245_23_24
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34611..35780)
DNA (1170bp) protein (390aa)
galactonate dehydratase n=1 Tax=Echinicola pacifica RepID=UPI00036B3DB9
galactonate dehydratase
Galactonate dehydratase {ECO:0000313|EMBL:AIZ43538.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
GCF_000373245_23_25
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35846..36883)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037FABE3
sugar:proton symporter
Sugar:proton symporter {ECO:0000313|EMBL:AIZ43858.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica 18.;"
GCF_000373245_23_26
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(37144..38472)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000372C31A
Gluconate transporter {ECO:0000313|EMBL:EMI47084.1}; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
gntT3; high-affinity gluconate transporter
GCF_000373245_23_27
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38587..39447)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036D6F0E
Bacillibactin transport regulator {ECO:0000313|EMBL:GAF02150.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
AraC family transcriptional regulator
GCF_000373245_23_28
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(39607..40437)
DNA (831bp) protein (277aa)
elongation factor Ts n=1 Tax=Echinicola pacifica RepID=UPI0003780D95
translation elongation factor Ts
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_29
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(40595..41356)
DNA (762bp) protein (254aa)
30S ribosomal protein S2 n=1 Tax=Echinicola pacifica RepID=UPI0003825C08
30S ribosomal protein S2
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
GCF_000373245_23_30
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists


comp(41399..41785)
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=1 Tax=Echinicola pacifica RepID=UPI00037F24A2
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
Displaying items 1-30 of 124 in total

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