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GCA_002401485_28

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GCA_002401485_28_1

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comp(3..1376)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82V33_NITEU
Uncharacterized protein {ECO:0000313|EMBL:KKN71629.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
GCA_002401485_28_2

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comp(1549..2208)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B72659
Marine sediment metagenome DNA, contig: S01H4_S06907 {ECO:0000313|EMBL:GAG91737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
GCA_002401485_28_3
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2202..2993)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B66E4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI05342.1}; TaxID=765869 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
GCA_002401485_28_4
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2993..3595)
DNA (603bp) protein (201aa)
Probable lipoprotein n=1 Tax=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) RepID=Q6MNN7_BDEBA
LemA family protein {ECO:0000313|EMBL:KHD89366.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
lemA; lipoprotein
GCA_002401485_28_5
unknown

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3739..3864
DNA (126bp) protein (42aa)

This feature has no annotations

GCA_002401485_28_6
unknown

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3861..3953
DNA (93bp) protein (31aa)

This feature has no annotations

GCA_002401485_28_7
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4071..4697)
DNA (627bp) protein (209aa)
Tax=BJP_08E140C01_Bacteriodales_41_10
GCA_002401485_28_8
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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4812..5366
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Ahrensia sp. R2A130 RepID=E0MJ39_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:GAK34238.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
hypothetical protein
GCA_002401485_28_9
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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5478..5972
DNA (495bp) protein (165aa)
Tellurite resistance protein TerB {ECO:0000313|EMBL:KHE94035.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein PflaJ_22754 id=4404589 bin=GWF2_OP3_38_59 species=Pseudoalteromonas luteoviolacea genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
GCA_002401485_28_10

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6253..7368
DNA (1116bp) protein (372aa)
Putative aminotransferase class-V n=1 Tax=uncultured marine microorganism HF4000_APKG10F17 RepID=B3TC21_9ZZZZ
Putative aminotransferase class-V {ECO:0000313|EMBL:ABZ10130.1}; TaxID=455558 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10F17.;"
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
GCA_002401485_28_11

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7365..8120
DNA (756bp) protein (252aa)
Putative Nucleotidyl transferase n=1 Tax=uncultured marine microorganism HF4000_APKG10F17 RepID=B3TC20_9ZZZZ
Putative Nucleotidyl transferase {ECO:0000313|EMBL:ABZ10129.1}; TaxID=455558 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10F17.;"
nucleotidyl transferase
GCA_002401485_28_12

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8120..8938
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=gamma proteobacterium SCGC AAA076-P09 RepID=UPI00037E4F2B
Putative CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABZ10128.1}; TaxID=455558 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10F17.;"
hypothetical protein
GCA_002401485_28_13

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8939..9670
DNA (732bp) protein (244aa)
Putative CDP-alcohol phosphatidyltransferase n=1 Tax=uncultured marine microorganism HF4000_APKG10F17 RepID=B3TC19_9ZZZZ
Putative CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ABZ10128.1}; TaxID=455558 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10F17.;"
hypothetical protein
GCA_002401485_28_14
unknown

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9683..9889
DNA (207bp) protein (69aa)

This feature has no annotations

GCA_002401485_28_15
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9926..10201
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYD9_9AQUI
Small mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EWY42397.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
small-conductance mechanosensitive channel
GCA_002401485_28_16
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(10298..11524)
DNA (1227bp) protein (409aa)
response regulator receiver/GGDEF/EAL domain-containing protein id=14426278 bin=bin1_lowGC species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
sensory transduction histidine kinase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
GCA_002401485_28_17

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comp(11544..12749)
DNA (1206bp) protein (402aa)
Multi-sensor signal transduction histidine kinase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZKU1_9ZZZZ
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EQD45057.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
histidine kinase
GCA_002401485_28_18
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12816..14153)
DNA (1338bp) protein (446aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:BAN33874.1}; EC=2.6.1.- {ECO:0000313|EMBL:BAN33874.1};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Aminotransferase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHC1_9PROT
GCA_002401485_28_19
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(14221..17463)
DNA (3243bp) protein (1081aa)
Putative transmembrane transporter id=4926746 bin=GWA2_Elusimicrobia_69_24 species=Pelagibacterium halotolerans genus=Pelagibacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
GCA_002401485_28_20
Yersinia pseudotuberculosis, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17550..18623)
DNA (1074bp) protein (358aa)
ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC (EC:3.6.3.20)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000255|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000255|HAMAP-Rule:MF_01727};; TaxID=273123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia pseudotuberculosis serotype I (strain IP32953).;"
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=5 Tax=Yersinia pseudotuberculosis RepID=UGPC_YERPS
GCA_002401485_28_21
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(18635..19447)
DNA (813bp) protein (271aa)
Sugar permeases n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RBL5_THETN
MalG; sugar permease
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:KHO62074.1}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
GCA_002401485_28_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19444..20331)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035E1970
MalF; sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:ERM91134.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
GCA_002401485_28_23
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(20328..21554)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI00036DE874
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:KHO62072.1}; Flags: Precursor;; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter sp. YS13.;"
family 1 extracellular solute-binding protein
GCA_002401485_28_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(21551..23560)
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPP1_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93807.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
GCA_002401485_28_25
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(23563..25959)
DNA (2397bp) protein (799aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003651690
Glutamyl peptidase {ECO:0000313|EMBL:BAL54632.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
glutamyl peptidase
GCA_002401485_28_26
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26005..26976
DNA (972bp) protein (324aa)
Glycosidase, PH1107-related n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSH3_9FIRM
Glycosidase, PH1107-related {ECO:0000313|EMBL:EAX47036.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
glycosidase
GCA_002401485_28_27
GWC2_Elusimicrobia_64_44_curated, Elusimicrobia, Bacteria

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comp(26942..28414)
DNA (1473bp) protein (491aa)
Putative arylsulfatase id=3182743 bin=GWC2_Elusimicrobia_64_44 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
putative arylsulfatase
Tax=GWC2_Elusimicrobia_64_44_curated
GCA_002401485_28_28
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(28414..29811)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036AFC1F
sulfatase
Tax=RBG_13_WOR_2_41_10_curated
GCA_002401485_28_29
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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comp(29829..31127)
DNA (1299bp) protein (433aa)
hypothetical protein id=3055745 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
GCA_002401485_28_30
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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31156..35037
DNA (3882bp) protein (1294aa)
Omega-3 polyunsaturated fatty acid synthase PfaA n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZV1_9ACTN
Omega-3 polyunsaturated fatty acid synthase subunit, PfaA {ECO:0000313|EMBL:AKF05205.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
pfaA; omega-3 polyunsaturated fatty acid synthase PfaA
Displaying items 1-30 of 38 in total

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