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QC4_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_598_1
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(437..2077)
DNA (1641bp) protein (547aa)
lnt; apolipoprotein N-acyltransferase (EC:2.3.1.-)
Apolipoprotein N-acyltransferase Tax=Smithella sp. ME-1 RepID=V4EQL0_9DELT
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
QC4_scaffold_598_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2083..4791)
DNA (2709bp) protein (903aa)
Protein translocase subunit SecA bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
protein translocase subunit SecA
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_598_3
uncultured Termite group 1 bacterium, Elusimicrobia, Bacteria

Not on your lists

comp(4980..5213)
DNA (234bp) protein (78aa)
Cold shock RNA chaperon protein Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZJ2_UNCTG
cold shock RNA chaperon protein
Cold shock RNA chaperon protein {ECO:0000313|EMBL:BAG13674.1}; species="Bacteria; Elusimicrobia; environmental samples.;" source="Uncultured termite group 1 bacterium phylotype Rs-D17.;"
QC4_scaffold_598_4
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(5291..7672)
DNA (2382bp) protein (794aa)
O-antigen polymerase bin=GWA2_Elusimicrobia_51_34 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
O-antigen polymerase
Tax=CG_Elusi_05
QC4_scaffold_598_5
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(7669..10317)
DNA (2649bp) protein (883aa)
O-antigen polymerase bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
O-antigen polymerase
Tax=CG_Elusi_05
QC4_scaffold_598_trna_3
unknown

Not on your lists

comp(10348..10419)
DNA (72bp)
transferRNA Thr
QC4_scaffold_598_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

10557..13052
DNA (2496bp) protein (832aa)
Putative Fe-S oxidoreductase Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZC9_UNCTG
putative Fe-S oxidoreductase
Tax=CG_Elusi_05
QC4_scaffold_598_7

Not on your lists

13719..14489
DNA (771bp) protein (257aa)
Cyclase family protein Tax=Mesotoga sp. PhosAc3 RepID=N1JMQ3_9THEM
Marine sediment metagenome DNA, contig: S01H1_C00559 {ECO:0000313|EMBL:GAF79216.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metal-dependent hydrolase
QC4_scaffold_598_8
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

14486..16285
DNA (1800bp) protein (600aa)
Sporulation protein-like protein bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
sporulation protein-like protein
Tax=GWC2_Elusimicrobia_56_31_curated
QC4_scaffold_598_trna_1
unknown

Not on your lists

16294..16383
DNA (90bp)
transferRNA Ser
QC4_scaffold_598_9
unknown

Not on your lists

16517..16795
DNA (279bp) protein (93aa)

This feature has no annotations

QC4_scaffold_598_10
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

16804..17079
DNA (276bp) protein (92aa)
hypothetical protein bin=CNBR_ACIDO species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
QC4_scaffold_598_trna_2
unknown

Not on your lists

17107..17178
DNA (72bp)
transferRNA Phe
QC4_scaffold_598_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17227..18597)
DNA (1371bp) protein (457aa)
Rod shape-determining protein MrdB Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB6_UNCTG
rod shape-determining protein MrdB
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_598_12
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18636..20420)
DNA (1785bp) protein (595aa)
Rod shape-determining protein MrdA Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB5_UNCTG
rod shape-determining protein MrdA
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_598_13
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(20427..20906)
DNA (480bp) protein (160aa)
Rod shape-determining protein MreD Tax=Treponema phagedenis F0421 RepID=E7NVF3_TREPH
hypothetical protein
Tax=CG_Elusi_05
QC4_scaffold_598_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20903..21745)
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NJR6_DESTT
mreC; rod shape-determining protein C MreC
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_598_15
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21779..22804)
DNA (1026bp) protein (342aa)
Rod shape-determining protein MreB Tax=Uncultured termite group 1 bacterium phylotype Rs-D17 RepID=B1GZB2_UNCTG
rod shape-determining protein MreB
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_598_16
Nitratiruptor sp. SB155-2, Nitratiruptor, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22837..23199)
DNA (363bp) protein (121aa)
50S ribosomal protein L17 Tax=Nitratiruptor sp. (strain SB155-2) RepID=RL17_NITSB
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000255|HAMAP-Rule:MF_01368}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nitratiruptor.;" source="Nitratiruptor sp. (strain SB155-2).;"
QC4_scaffold_598_17
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(23196..24155)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=CG_Elusi_05
QC4_scaffold_598_18
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(24173..24793)
DNA (621bp) protein (207aa)
30S ribosomal protein S4 Tax=Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL) RepID=E4Q2Y9_CALOW
30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor owensensis (strain ATCC 700167 / DSM 13100 / OL).;"
QC4_scaffold_598_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists


comp(24806..25180)
DNA (375bp) protein (125aa)
Ribosomal protein S11 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
rpsK; 30S ribosomal protein S11
Tax=CG_Elusi_05
QC4_scaffold_598_20
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists


comp(25207..25614)
DNA (408bp) protein (136aa)
30S ribosomal protein S13 Tax=Caloramator australicus RC3 RepID=I7LGH4_9CLOT
30S ribosomal protein S13
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
QC4_scaffold_598_21
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(25765..26013)
DNA (249bp) protein (83aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00036A59C5
infA; Translation initiation factor IF-1
Tax=CG_Elusi_05
QC4_scaffold_598_22
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(26010..26903)
DNA (894bp) protein (298aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_598_23
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(26881..27570)
DNA (690bp) protein (230aa)
nucleoside-triphosphate--adenylate kinase (EC:2.7.4.10)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
Adenylate kinase Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E1F3_DICTD
QC4_scaffold_598_24
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists


comp(27582..28910)
DNA (1329bp) protein (443aa)
Protein translocase subunit SecY bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
protein translocase subunit SecY
Tax=CG_Elusi_05
QC4_scaffold_598_25
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists


comp(28917..29399)
DNA (483bp) protein (161aa)
50S ribosomal protein L15 Tax=Geovibrio thiophilus RepID=UPI0003B30BA3
rplO; 50S ribosomal protein L15
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_598_26
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists


comp(29435..30025)
DNA (591bp) protein (197aa)
30S ribosomal protein S5 Tax=Methylacidiphilum fumariolicum SolV RepID=I0K0C6_9BACT
30S ribosomal protein S5
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
QC4_scaffold_598_27
uncultured Chlorobi bacterium, Chlorobi, Bacteria

Not on your lists


comp(30029..30403)
DNA (375bp) protein (125aa)
50S ribosomal protein L18 Tax=uncultured Chlorobi bacterium RepID=H5SGN7_9BACT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; species="Bacteria; Chlorobi; environmental samples.;" source="uncultured Chlorobi bacterium.;"
50S ribosomal protein L18
Displaying items 1-30 of 48 in total

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