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QC4_scaffold_815

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_815_1
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

1..2931
DNA (2931bp) protein (977aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_56_46 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_815_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

3063..6914
DNA (3852bp) protein (1284aa)
PKD domain containing protein bin=GWB2_Elusimicrobium_63_22 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
protein kinase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_3
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

6943..8580
DNA (1638bp) protein (546aa)
Putative uncharacterized protein bin=GWC2_Elusimicrobia_64_44 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=CG_Elusi_05
QC4_scaffold_815_4
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

8577..9413
DNA (837bp) protein (279aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_815_5
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9361..10125)
DNA (765bp) protein (255aa)
ABC-2 type transporter Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WN92_METH6
ABC transporter
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_6
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10135..10779)
DNA (645bp) protein (215aa)
ABC-type multidrug transport system, ATPase component Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YTW2_AEQSU
multidrug ABC transporter ATPase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_7
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

10853..12103
DNA (1251bp) protein (417aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B55E95
polysaccharide export protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_8
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

12185..14059
DNA (1875bp) protein (625aa)
Capsular exopolysaccharide family bin=GWA2_Elusimicrobia_56_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
protein-tyrosine kinase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_9
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

14085..15458
DNA (1374bp) protein (458aa)
hypothetical protein bin=GWA2_Elusi-like_A8_64_40 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
O-antigen polymerase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_10
unknown

Not on your lists

comp(15865..16080)
DNA (216bp) protein (72aa)

This feature has no annotations

QC4_scaffold_815_11
unknown

Not on your lists

16764..16937
DNA (174bp) protein (58aa)

This feature has no annotations

QC4_scaffold_815_12
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17160..17876)
DNA (717bp) protein (239aa)
3-dehydroquinate dehydratase {ECO:0000256|SAAS:SAAS00219718}; EC=4.2.1.10 {ECO:0000256|SAAS:SAAS00219718, ECO:0000313|EMBL:CDL91006.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
UPI0003C7B98D related cluster Tax=unknown RepID=UPI0003C7B98D
QC4_scaffold_815_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17880..20105)
DNA (2226bp) protein (742aa)
Amylopullulanase bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
amylopullulanase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_14
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20128..21456)
DNA (1329bp) protein (443aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
QC4_scaffold_815_15
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(21518..22975)
DNA (1458bp) protein (486aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_815_16
unknown

Not on your lists

comp(22944..23075)
DNA (132bp) protein (44aa)

This feature has no annotations

QC4_scaffold_815_17
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23278..23907)
DNA (630bp) protein (210aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
outer membrane assembly lipoprotein YfiO
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_trna_2
unknown

Not on your lists

comp(23931..24002)
DNA (72bp)
transferRNA Arg
QC4_scaffold_815_18
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24013..24534)
DNA (522bp) protein (174aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C447_THENR
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
QC4_scaffold_815_19
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(24536..25381)
DNA (846bp) protein (282aa)
RNA polymerase sigma factor Tax=uncultured bacterium CSLF42 RepID=G4WVX9_9BACT
DNA-directed RNA polymerase sigma subunit RpoH
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_20
MPI_TA06_32_111, Bacteria

Not on your lists

comp(25385..25666)
DNA (282bp) protein (94aa)
acylphosphatase Tax=Sporolactobacillus inulinus RepID=UPI000255C7C2
acylphosphatase
Tax=MPI_TA06_32_111
QC4_scaffold_815_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(25698..26402)
DNA (705bp) protein (235aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_815_22
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(26406..27734)
DNA (1329bp) protein (443aa)
malate dehydrogenase (EC:1.1.1.40)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) {ECO:0000313|EMBL:AEA47177.1}; EC=1.1.1.40 {ECO:0000313|EMBL:AEA47177.1};; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)) Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMI0_ARCVS
QC4_scaffold_815_trna_1
unknown

Not on your lists

comp(27786..27861)
DNA (76bp)
transferRNA Pro
QC4_scaffold_815_23
GWF1_Spirochaetes_41_5_curated, Spirochaetes, Bacteria

Not on your lists

comp(27869..28366)
DNA (498bp) protein (166aa)
Putative membrane protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH3_METHD
hypothetical protein
Tax=GWF1_Spirochaetes_41_5_curated
QC4_scaffold_815_24
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28389..28745)
DNA (357bp) protein (119aa)
Putative transcriptional regulator bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
transcriptional regulator
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
QC4_scaffold_815_25
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28750..29028)
DNA (279bp) protein (93aa)
transcriptional regulator Tax=Thermodesulfatator atlanticus RepID=UPI0003B42BA5
histone family protein DNA-binding protein
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_815_26
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(29025..30071)
DNA (1047bp) protein (349aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
NAD-dependent glycerol-3-phosphate dehydrogenase
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
QC4_scaffold_815_27
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(30076..30681)
DNA (606bp) protein (202aa)
Glycerol-3-phosphate acyltransferase Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NX21_GRAMM
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
QC4_scaffold_815_28
RIFOXYA2_FULL_RIF01_40_8_curated, RIF1, Bacteria

Not on your lists

comp(30678..31217)
DNA (540bp) protein (180aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase bin=GWB2_Nitrospirae_rel_47_37 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
CDP-alcohol phosphatidyltransferase
Tax=RIFOXYA2_FULL_RIF01_40_8_curated
Displaying items 1-30 of 31 in total

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