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QC4_scaffold_1838

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
QC4_scaffold_1838_1
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

1..5295
DNA (5295bp) protein (1765aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
QC4_scaffold_1838_2
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

5918..7282
DNA (1365bp) protein (455aa)
Sigma factor regulatory protein, FecR/PupR family bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
OmpA/MotB domain-containing protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1838_3
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

7414..8625
DNA (1212bp) protein (404aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1838_4
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

8830..9744
DNA (915bp) protein (305aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1838_trna_2
unknown

Not on your lists

comp(10054..10126)
DNA (73bp)
transferRNA Lys
QC4_scaffold_1838_5
RIFOXYA2_FULL_Elusimicrobia_69_6_curated, Elusimicrobia, Bacteria

Not on your lists

10426..10917
DNA (492bp) protein (164aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
N-terminal methylation motif domain-containing protein
Tax=RIFOXYA2_FULL_Elusimicrobia_69_6_curated
QC4_scaffold_1838_6
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

11067..11843
DNA (777bp) protein (259aa)
peptidase Tax=Hippea alviniae RepID=UPI0003B55545
peptidase A24
Tax=CG_Elusi_05
QC4_scaffold_1838_7
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(11863..12480)
DNA (618bp) protein (206aa)
Tax=CG_Elusi_05
QC4_scaffold_1838_8
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(12471..13574)
DNA (1104bp) protein (368aa)
Pyruvate formate-lyase activating enzyme-like protein bin=GWF2_Lentisphaerae_49_21 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
radical SAM protein
Tax=CG_Elusi_05
QC4_scaffold_1838_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13571..14239)
DNA (669bp) protein (223aa)
Nitroreductase family protein bin=GWE2_Bacteroidetes_32_14 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
QC4_scaffold_1838_10
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14508..15794)
DNA (1287bp) protein (429aa)
Putative uncharacterized protein Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EFU1_AMICL
hypothetical protein
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_1838_11
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(15802..16428)
DNA (627bp) protein (209aa)
Orotate phosphoribosyltransferase Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E176_DICTD
orotate phosphoribosyltransferase
Tax=CG_Elusi_05
QC4_scaffold_1838_12
Thermosipho melanesiensis, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(16431..16889)
DNA (459bp) protein (153aa)
SsrA-binding protein Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=SSRP_THEM4
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho melanesiensis (strain BI429 / DSM 12029).;"
QC4_scaffold_1838_trna_1
unknown

Not on your lists

comp(16983..17067)
DNA (85bp)
transferRNA Leu
QC4_scaffold_1838_13
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(17117..17482)
DNA (366bp) protein (122aa)
acetoacetate metabolism regulatory protein AtoC Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B57E45
two component transcriptional regulator, sigma54-specific
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
QC4_scaffold_1838_14
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17815..18228)
DNA (414bp) protein (138aa)
Single-stranded DNA-binding protein Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E1R1_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
single-strand binding protein
QC4_scaffold_1838_15
RIFOXYA2_FULL_Elusimicrobia_40_6_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18267..18542)
DNA (276bp) protein (92aa)
hypothetical protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFOXYA2_FULL_Elusimicrobia_40_6_curated
QC4_scaffold_1838_16
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18545..19429)
DNA (885bp) protein (295aa)
Protease HtpX homolog Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P9Q6_DEFDS
htpX; peptidase M48 family
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
Displaying 18 items

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