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scnpilot_expt_750_bf_scaffold_505

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Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_505_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223..519
DNA (297bp) protein (99aa)
Helix-turn-helix domain protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BQW2_OLICM
Transcriptional regulator {ECO:0000313|EMBL:ETR79456.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
helix-turn-helix domain-containing protein
scnpilot_expt_750_bf_scaffold_505_2
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592..1002
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NUU2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS32926.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
transcriptional regulator
scnpilot_expt_750_bf_scaffold_505_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1105..1329)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NRD0_9BRAD
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
single-strand binding protein/primosomal replication protein n
scnpilot_expt_750_bf_scaffold_505_4
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1941..3173)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NWQ5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS32929.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
replication initiation protein RepC
scnpilot_expt_750_bf_scaffold_505_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3370..4392)
DNA (1023bp) protein (341aa)
Plasmid partitioning protein RepB n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND59_AFIFE rbh
Plasmid partitioning protein RepB {ECO:0000313|EMBL:CEG10452.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
ParB family protein
scnpilot_expt_750_bf_scaffold_505_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4389..5738)
DNA (1350bp) protein (450aa)
Plasmid partitioning protein RepA n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH31_AFIFE rbh
Sporulation initiation inhibitor protein soj {ECO:0000313|EMBL:CEG10451.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
putative replication protein A
scnpilot_expt_750_bf_scaffold_505_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5815..6987)
DNA (1173bp) protein (391aa)
integrase n=1 Tax=Afipia birgiae RepID=UPI0002F1A3C1 rbh
Integrase {ECO:0000313|EMBL:ETR79462.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
integrase/recombinase protein
scnpilot_expt_750_bf_scaffold_505_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6996..8090)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK25_OLICO
Uncharacterized protein {ECO:0000313|EMBL:ETR79463.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_9
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8153..8422
DNA (270bp) protein (90aa)
Prevent-host-death protein n=2 Tax=Bradyrhizobiaceae RepID=Q1QFA3_NITHX
Prevent-host-death protein {ECO:0000313|EMBL:ETR79464.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
prevent-host-death protein
scnpilot_expt_750_bf_scaffold_505_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8426..8872
DNA (447bp) protein (149aa)
Acyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIC0_9BRAD
Plasmid maintenance toxin (PemK-like) {ECO:0000313|EMBL:ETR79465.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp.
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9072..10286
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEN6_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ39790.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10416..11387
DNA (972bp) protein (324aa)
Uncharacterized AAA family ATPase y4kL n=1 Tax=Rhizobium sp. (strain NGR234) RepID=Y4KL_RHISN rbh
Bradyrhizobium elkanii strain UASWS1015 Contig119, whole genome shotgun sequence {ECO:0000313|EMBL:KIU54163.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
ATPase AAA
scnpilot_expt_750_bf_scaffold_505_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11395..13734
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRQ4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR79468.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13804..14085)
DNA (282bp) protein (94aa)
Mercuric transport protein periplasmic component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ6_NITHX
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
mercuric transport protein periplasmic protein
scnpilot_expt_750_bf_scaffold_505_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14097..14477)
DNA (381bp) protein (127aa)
Mercuric ion transport protein, MerT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ5_NITHX
mercuric ion transport protein, MerT
Mercuric ion transport protein, MerT {ECO:0000313|EMBL:ABE65002.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobac
scnpilot_expt_750_bf_scaffold_505_16
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14488..15183)
DNA (696bp) protein (232aa)
Cytochrome c biogenesis protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSW7_9BRAD rbh
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EIG62873.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
putative cytochrome c biogenesis protein
scnpilot_expt_750_bf_scaffold_505_17
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15183..15431)
DNA (249bp) protein (83aa)
Thioredoxin/glutaredoxin n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ3_NITHX
thioredoxin/glutaredoxin
Thioredoxin/glutaredoxin {ECO:0000313|EMBL:ABE65004.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburge
scnpilot_expt_750_bf_scaffold_505_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15447..15866)
DNA (420bp) protein (140aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ2_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53547.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
MerR family transcriptional regulator
scnpilot_expt_750_bf_scaffold_505_19
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15946..17181)
DNA (1236bp) protein (412aa)
Arabinose efflux permease family protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QSX0_9BRAD
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIG62876.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B
MFS transporter
scnpilot_expt_750_bf_scaffold_505_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17185..19638)
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE65007.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitro
scnpilot_expt_750_bf_scaffold_505_21
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19684..19920)
DNA (237bp) protein (79aa)
Cation translocating P-type ATPase n=2 Tax=Oligotropha carboxidovorans RepID=B6JKB2_OLICO
Mercuric reductase {ECO:0000313|EMBL:CEG10191.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease
cation translocating P-type ATPase
scnpilot_expt_750_bf_scaffold_505_22
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20569..21411)
DNA (843bp) protein (281aa)
ArdC-like protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JK10_OLICO
ArdC-like protein
Putative conjugal transfer antirestriction protein {ECO:0000313|EMBL:AEI08345.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" so
scnpilot_expt_750_bf_scaffold_505_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21714..22301)
DNA (588bp) protein (196aa)
ArgG gene in streptomyces clavuligerus-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFD3_NITHX rbh
Uncharacterized protein {ECO:0000313|EMBL:KIZ36387.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_24
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22690..23016)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EUR8_BRASB
Uncharacterized protein {ECO:0000313|EMBL:KIZ36385.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23013..23495)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFD5_NITHX
Uncharacterized protein {ECO:0000313|EMBL:KIZ36384.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24467..24790
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR87_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_505_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24871..25173
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4I1_9RHIZ
WGR domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EIM31123.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononid
scnpilot_expt_750_bf_scaffold_505_28

Not on your lists

comp(25198..26067)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036DD7A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN79089.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative alpha/beta hydrolase superfamily, alr3514-like protein
scnpilot_expt_750_bf_scaffold_505_29
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26082..26270)
DNA (189bp) protein (63aa)
Putative Fe-S protein n=1 Tax=Caulobacter crescentus OR37 RepID=R0D2L8_CAUCE
Putative Fe-S protein {ECO:0000313|EMBL:ENZ82881.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescen
putative Fe-S protein
scnpilot_expt_750_bf_scaffold_505_30
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26274..28271)
DNA (1998bp) protein (666aa)
Heavy metal translocating P-type ATPase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH49_AFIFE rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKS28361.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fel
ATPase
Displaying items 1-30 of 112 in total

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