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scnpilot_expt_750_bf_scaffold_505

Search features with annotation key words

Displaying items 31-60 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_505_31
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28288..28563)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037A8C43
Uncharacterized protein {ECO:0000313|EMBL:EKS28360.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
metal-sensitive transcriptional repressor family protein
scnpilot_expt_750_bf_scaffold_505_32

Not on your lists

29050..29847
DNA (798bp) protein (266aa)
Transposase n=1 Tax=uncultured bacterium RepID=E8PRN2_9BACT
Transposase {ECO:0000313|EMBL:ADU90787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
tn3 transposase DDE domain protein
scnpilot_expt_750_bf_scaffold_505_33
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30037..30657
DNA (621bp) protein (207aa)
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53396.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
autoinducer synthase
scnpilot_expt_750_bf_scaffold_505_34
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30689..30934
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_35
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31004..31786)
DNA (783bp) protein (261aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:CDM62358.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="R
scnpilot_expt_750_bf_scaffold_505_36
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31955..32659)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53756.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_37
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32684..33250)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53755.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_38
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33394..34062)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08324.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_505_39
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34072..34620)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26858.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_40
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34617..35201)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G2_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26857.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative nuclease
scnpilot_expt_750_bf_scaffold_505_41
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35188..35526)
DNA (339bp) protein (113aa)
Single-stranded DNA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND73_AFIFE
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae;
putative single-stranded DNA-binding protein
scnpilot_expt_750_bf_scaffold_505_42
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35523..36158)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NH39_AFIFE rbh
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53752.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_43
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36160..36660)
DNA (501bp) protein (167aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR75_OLICM rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08319.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_505_44
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36759..37490
DNA (732bp) protein (244aa)
Lytic transglycosylase, catalytic n=2 Tax=Oligotropha carboxidovorans RepID=B6JK40_OLICO rbh
putative lytic transglycosylase
Putative lytic transglycosylase {ECO:0000313|EMBL:AEI08318.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c
scnpilot_expt_750_bf_scaffold_505_45
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37504..37806
DNA (303bp) protein (101aa)
Conjugal transfer protein, TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JK41_OLICO
virB2; type IV secretion family protein VirB2
Type IV secretion family protein VirB2 {ECO:0000313|EMBL:AEI08317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot
scnpilot_expt_750_bf_scaffold_505_46
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37803..38099
DNA (297bp) protein (99aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK42_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53814.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
virB3; type IV secretion protein VirB3
scnpilot_expt_750_bf_scaffold_505_47
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38109..39932
DNA (1824bp) protein (608aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
Type VI secretion protein {ECO:0000313|EMBL:KIZ46696.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
virB4; type IV secretion protein VirB4
scnpilot_expt_750_bf_scaffold_505_48
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39916..40386
DNA (471bp) protein (157aa)
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO
Type VI secretion protein {ECO:0000313|EMBL:KIZ46696.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
type IV secretion/conjugal transfer ATPase
scnpilot_expt_750_bf_scaffold_505_49
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40383..41279
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK44_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53812.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
hypothetical protein
scnpilot_expt_750_bf_scaffold_505_50
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41290..42006
DNA (717bp) protein (239aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK45_OLICO rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08313.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_expt_750_bf_scaffold_505_51
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42026..42214
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK46_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE65026.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Ni
scnpilot_expt_750_bf_scaffold_505_52
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42211..42405
DNA (195bp) protein (65aa)
Putative lipoprotein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JK47_OLICO
lipoprotein
Lipoprotein {ECO:0000313|EMBL:KIZ46693.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
scnpilot_expt_750_bf_scaffold_505_53
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42413..43543
DNA (1131bp) protein (377aa)
TrbL/VirB6 plasmid conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK48_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
virB6; type IV secretion protein VirB6
scnpilot_expt_750_bf_scaffold_505_54
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43540..44256
DNA (717bp) protein (239aa)
Type IV secretion protein VirB8 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK49_OLICO rbh
virulence protein
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53117.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
scnpilot_expt_750_bf_scaffold_505_55
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44253..45056
DNA (804bp) protein (268aa)
P-type conjugative transfer protein VirB9 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK50_OLICO rbh
virB9; type IV secretion protein VirB9
Type IV secretion protein VirB9 {ECO:0000313|EMBL:AEI08310.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha c
scnpilot_expt_750_bf_scaffold_505_56
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45059..46411
DNA (1353bp) protein (451aa)
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK51_OLICO rbh
virB10; type IV secretion protein VirB10
Type IV secretion protein VirB10 {ECO:0000313|EMBL:AEI08309.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha
scnpilot_expt_750_bf_scaffold_505_57
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46374..47447
DNA (1074bp) protein (358aa)
Type II secretion system protein E n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH6_NITHX rbh
Bradyrhizobium elkanii strain UASWS1015 Contig146, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrh
type II secretion system protein E
scnpilot_expt_750_bf_scaffold_505_58
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47425..49575
DNA (2151bp) protein (717aa)
TRAG protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFH7_NITHX rbh
TRAG protein {ECO:0000313|EMBL:ABE65020.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter h
TRAG protein
scnpilot_expt_750_bf_scaffold_505_59
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49753..50082
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003667265
Phosphate-binding protein PstS {ECO:0000256|PIRNR:PIRNR002756}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidis
phosphate ABC transporter substrate-binding protein
scnpilot_expt_750_bf_scaffold_505_60
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50526..50855)
DNA (330bp) protein (110aa)
membrane protein n=1 Tax=Afipia birgiae RepID=UPI000313EF84
Membrane protein {ECO:0000313|EMBL:KIZ48012.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
hypothetical protein
Displaying items 31-60 of 112 in total

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