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scnpilot_expt_750_bf_scaffold_505_45

Organism: SCNPILOT_EXPT_750_BF_Plasmid_61_16

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 37504..37806

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein, TrbC n=2 Tax=Oligotropha carboxidovorans RepID=B6JK41_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 100.0
  • Bit_score: 183
  • Evalue 1.10e-43
virB2; type IV secretion family protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 100.0
  • Bit_score: 183
  • Evalue 3.00e-44
Type IV secretion family protein VirB2 {ECO:0000313|EMBL:AEI08317.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 100.0
  • Bit_score: 183
  • Evalue 1.50e-43

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGAGGAGATCATTATCCCGCTGGGCGCTTACCGGATCGCTCTTGGCGATGAGCGTCGTTGAGGCGGCGGCACAGTCCGGCGGAACGCTGCAGCCGGTTCAATCGACATTGACCCAGCTGGTGTCGGCTCTGACCGGTCCGATCGCCACCGCACTCGCAACGCTCGCCGTCATCGCCTGCGGCTTCTTCGCGTGGTCGGGACGGCTGACCTGGGGCATCGCCGGCAGTGTCATTTTCGGCATCGTGCTGGTGTTCGGCTCGGCGCAGATCGTCCAGTTCTTCCAGTCTGCGGTCGGGCAATGA
PROTEIN sequence
Length: 101
MRRSLSRWALTGSLLAMSVVEAAAQSGGTLQPVQSTLTQLVSALTGPIATALATLAVIACGFFAWSGRLTWGIAGSVIFGIVLVFGSAQIVQFFQSAVGQ*