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This organism can only be binned in the context of its binning project CG02_land_8_20_14_3_00_150. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

SCNpilot_BF_INOC_scaffold_764_10

Organism: SCNpilot_BF_INOC_Plasmid_64_17

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 4467..5378

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGI8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 305.0
  • Bit_score: 374
  • Evalue 9.80e-101
Putative transglycosylase {ECO:0000313|EMBL:EZP81821.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 303.0
  • Bit_score: 459
  • Evalue 4.30e-126
lytic transglycosylase subunit similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 301.0
  • Bit_score: 372
  • Evalue 1.10e-100

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Taxonomy

Novosphingobium resinovorum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GTGCGCCTTACCCTCATCCCTTTGTTCGCGGAAAGGCCGTCTCATCCCTCCGTCCCGCTCGGGCAAAGGCCGGCCGGCGCGCGCAGCGAAGGTCAAGGGCGGCCAACGGCCGGCGCCCCGCGCGCACCCTTTACCGCAGCGAGCACGCTGGCAGGCTGGCGGCGGAGCGGAGTCGGATCGGCAGTGGCGCTTGCGATCGTGCTATTGTCCGGTGGCGCTGCGTCAGAATCAGCACTTGCGCAGGAAACGCCGGCCGCGCGATCGACAGCGGCTCATCCCTACGCTGTCCATGTCGCGGATGCAGCGCGGCGCTTCGGCATACCCGAAGCGTGGATTTGGGCGGTGATGCGCGTCGAAAGCCGTGGCGTTTCGCGGGCGGTCTCGCCGGCCGGGGCGATGGGCTTGATGCAAATCATGCCCGTGACCTGGGCCGGTCTTCGCGCTCGCTACGGTCTTGGTTCCGATCCGTTCGACGTGCGCGACAACATCATGGCGGGCGCGGCTTATCTGCGCGAGATGCACGACCGCTACGGCAATGCGAGCGCGATGCTGGCGGCCTACAATGCGGGACCGGGCCGCTACGACGACTTCGTGTCGCGTGGCCGTCCGCTGCCACCTGAGACGGTCGGCTATCTCGCCCAGCTCGCGCCGAGCGTTGGGACGGCGGGCGCAGCGGAGGTGGCGGTCAGCGTTCCGCCCGATCCGTTCGCTTGGCGCCGCGCCGCGCTATTCGTGCGCACGGCGAACGTCGCATCAGATGCGGTTGGCGTGCGGTCGGGCGGCACGCTCGATGCAACCGCATCGCCACCGGGACAGATCGCAGCAGACGAGGAGACCGCCGCCCCATCGTCGCCCGTCAGGGAGGCGGACACGCTGTTCGTACCCCGCGCCCGCGCGGGCCGACCGCAATGA
PROTEIN sequence
Length: 304
VRLTLIPLFAERPSHPSVPLGQRPAGARSEGQGRPTAGAPRAPFTAASTLAGWRRSGVGSAVALAIVLLSGGAASESALAQETPAARSTAAHPYAVHVADAARRFGIPEAWIWAVMRVESRGVSRAVSPAGAMGLMQIMPVTWAGLRARYGLGSDPFDVRDNIMAGAAYLREMHDRYGNASAMLAAYNAGPGRYDDFVSRGRPLPPETVGYLAQLAPSVGTAGAAEVAVSVPPDPFAWRRAALFVRTANVASDAVGVRSGGTLDATASPPGQIAADEETAAPSSPVREADTLFVPRARAGRPQ*