ggKbase home page

SCNpilot_BF_INOC_scaffold_764

Search features with annotation key words

Displaying items 1-30 of 69 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_764_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_764_2
Dietzia cinnamea, Dietzia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

257..649
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Dietzia cinnamea P4 RepID=E6JE39_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV90123.1}; TaxID=910954 species="Bacteria; Actinobacteria; Corynebacteriales; Dietziaceae; Dietzia.;" source="Dietzia cinnamea P4.;"
SCNpilot_BF_INOC_scaffold_764_3
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1047..1274)
DNA (228bp) protein (76aa)
Putative transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2W9K0_9SPHN
Putative transcriptional regulator {ECO:0000313|EMBL:EZP81812.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
XRE family transcriptional regulator
SCNpilot_BF_INOC_scaffold_764_4
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1444..1716
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D9Y1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81813.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1979..2647
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3V1_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50446.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_BF_INOC_scaffold_764_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2779..3045
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S339_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50445.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_BF_INOC_scaffold_764_7
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3042..3548
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81818.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_8
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3545..4090
DNA (546bp) protein (182aa)
Conjugal transfer protein TraF n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNG9_9SPHN
Type IV secretory pathway, protease TraF {ECO:0000313|EMBL:EZP81819.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
conjugal transfer protein TraF
SCNpilot_BF_INOC_scaffold_764_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4127..4462
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2WMK0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81820.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_10
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4467..5378
DNA (912bp) protein (304aa)
Lytic transglycosylase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGI8_9SPHN
Putative transglycosylase {ECO:0000313|EMBL:EZP81821.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
lytic transglycosylase subunit
SCNpilot_BF_INOC_scaffold_764_11
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5503..7377
DNA (1875bp) protein (625aa)
Type IV secretory pathway, VirD2 component (Relaxase) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ5_9SPHN
Type IV secretory pathway, VirD2 component (Relaxase) {ECO:0000313|EMBL:EJK84230.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingob
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7393..9366
DNA (1974bp) protein (658aa)
Conjugal transfer coupling protein TraG n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7F2_9SPHN
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:AGH50439.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source=
conjugal transfer coupling protein TraG rbh
SCNpilot_BF_INOC_scaffold_764_13
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9376..9804
DNA (429bp) protein (143aa)
Helix-turn-helix domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S672_9SPHN
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EZP81824.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
helix-turn-helix domain-containing protein
SCNpilot_BF_INOC_scaffold_764_14
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9923..10963
DNA (1041bp) protein (347aa)
Conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIN3_9SPHN
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EZP81825.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novo
conjugal transfer protein TrbB
SCNpilot_BF_INOC_scaffold_764_15
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10960..11295
DNA (336bp) protein (112aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Sphingobium sp. AP49 RepID=J2WPQ8_9SPHN
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJK84235.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
conjugal transfer protein TrbC
SCNpilot_BF_INOC_scaffold_764_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11292..11573
DNA (282bp) protein (94aa)
Type IV secretory pathway, VirB3 family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S329_9SPHN
type IV secretory pathway, VirB3 family protein
Type IV secretory pathway, VirB3 family protein {ECO:0000313|EMBL:AGH50435.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;"
SCNpilot_BF_INOC_scaffold_764_17
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11570..14059
DNA (2490bp) protein (830aa)
Conjugal transfer ATPase TrbE n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S7E5_9SPHN
Conjugal transfer ATPase TrbE {ECO:0000313|EMBL:AGH50434.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomo
conjugal transfer ATPase TrbE rbh
SCNpilot_BF_INOC_scaffold_764_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14056..14814
DNA (759bp) protein (253aa)
Conjugal transfer protein TrbJ n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S664_9SPHN
conjugal transfer protein TrbJ rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AGH50433.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_BF_INOC_scaffold_764_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14819..15121
DNA (303bp) protein (101aa)
Conjugal transfer protein TrbK n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIM7_9SPHN
conjugal transfer protein TrbK
Conjugal transfer protein TrbK {ECO:0000313|EMBL:AGH50432.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_BF_INOC_scaffold_764_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15123..16433
DNA (1311bp) protein (437aa)
Conjugal transfer protein TrbL n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YP39_9SPHN
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAD50377.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
conjugal transfer protein TrbL rbh
SCNpilot_BF_INOC_scaffold_764_21
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16437..17120
DNA (684bp) protein (228aa)
Conjugal transfer protein TrbF n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S323_9SPHN
conjugal transfer protein TrbF rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:AGH50430.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
SCNpilot_BF_INOC_scaffold_764_22
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17117..18133
DNA (1017bp) protein (339aa)
P-type conjugative transfer protein TrbG n=1 Tax=Sphingobium sp. AP49 RepID=J2LCU1_9SPHN
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EJK85276.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sp
conjugal transfer protein TrbG
SCNpilot_BF_INOC_scaffold_764_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18130..19350
DNA (1221bp) protein (407aa)
Conjugation TrbI family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S658_9SPHN
conjugation TrbI family protein rbh
Conjugation TrbI family protein {ECO:0000313|EMBL:AGH50428.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
SCNpilot_BF_INOC_scaffold_764_24
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19347..19571
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SIM2_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50427.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
SCNpilot_BF_INOC_scaffold_764_25
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19586..19894)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3S9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP81836.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_26
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19926..20849)
DNA (924bp) protein (308aa)
Putative LysR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A6M3_9SPHN
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAD50383.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
LysR family transcriptional regulator
SCNpilot_BF_INOC_scaffold_764_27
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20953..21738)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000370F61A
Uncharacterized protein {ECO:0000313|EMBL:KIF12024.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCNpilot_BF_INOC_scaffold_764_28
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21800..22405)
DNA (606bp) protein (202aa)
Putative alkaline phosphatase-like protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UEF2_9RHOB
Alkaline phosphatase {ECO:0000313|EMBL:EXS70063.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. An
DedA family protein
SCNpilot_BF_INOC_scaffold_764_29
unknown

Not on your lists

comp(22413..23690)
DNA (1278bp) protein (426aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_764_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23687..24241)
DNA (555bp) protein (185aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93834.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 69 in total

View Taxonomy