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SCNpilot_cont_300_bf_scaffold_643_2

Organism: SCNPILOT_CONT_300_BF_Plasmid_66_13

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 7398..8798

Top 3 Functional Annotations

Value Algorithm Source
Putative type I secretion outer membrane protein, TolC family n=1 Tax=Variovorax paradoxus B4 RepID=T1XGX9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 438.0
  • Bit_score: 347
  • Evalue 2.60e-92
  • rbh
putative type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 438.0
  • Bit_score: 347
  • Evalue 7.30e-93
Putative type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:AGU51776.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vario similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 438.0
  • Bit_score: 347
  • Evalue 3.60e-92

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGTTTGAAAAAGACCTGCCCGGAAGGCGATATGCGCGCCTCCAGAAAATCATGTCCTTGCCGTTCACACGGCGCCATCTTGCCGGAGCTGTGTGCCTGGCCATGGGGGCCGGAGGCATGGCTGCCGCACAAACTGCCGATAACGGCCCGCTGGATATGGCCGGGGCCGTGCGCGCGGCCATCGCAACACACCCCAGCGTCCGCGGCGCCGGCGAGCAGGTGGGACAGGCCAATGCGGAGGTGGATGCGGCGCGCGCCGGCTACAAGCCGCAGATCACGGGCGGTATCGAAAATCAGATCAACAGCTACCGCAACACCAGCTACGATTCGCGCAACGTGTACACCGCCAGGCTGACCGGATCGCAGTTGGTGTATGATTTCGGCAAGGTCGCCGGAGGTGTTCGCAAGGCGGAGTCGGGCGTTCGCGCCCGCGAGGCGCAGGTCGAGCAGGCGACAGACGAAGTCGCGCTCAACACCGCGCAGGCTTGGGTGGACGCGCATCTTCAGCAACTCCTGGTGCAGATCTCGCGCGAGCAGCTTTCCGCCGTCATGTCGATTACGGCCCTGGTCACCGAACGAGTCGCCAAGGGGGCTACGTCGCGGTCGGACATGGAGCAGGCCCATTCCCGCGTCGAGGCGATGCGCTCGCAATTGCTGGGCGCCGAGGCCGAGGCGCTGCGCGCCAGCCTGACCCTAATGCACCTGACGGGTCGCACCGCGCCGGTCGCCATCACCGGGGATATCCCCGCCGAGTTGCAAAGCGCGGCGTGCCGGGATGGCGCTGAAGCGGATACCCCCGCCGTGCGTGCGGCCAGCGCCCGCCGCGACGAGGCACGCGCCGATCTCGATGTAGCCAGGGCGCAGCGCTATCCCACGGTGACGCTGGACGGGAGCGTCGGCCAGGCGCTGACCAACGGTTCGCGTCTCTACGGCGAATATCGCACGACCGGCCAGATCGGCCTCAATCTCTCGATGCCATTCTATCAGGGCGGGCGGGTGCAGGCGCAGGAGCGGGGCGCAATCCATCAGTTGCGTGCCTATGAAGATGCCGTCCGGCAAGCGCGGTTGGAGACGGCTCAGGGGTTTGCCGACGCCAGGGCACAGTTCGATGGCTGGGCACAGCGCGAGCCGGTGCTGCAAACCCGCGTCGCCAGTATCGACGCCACGCGCGATCTCTATCGCCAGCAATATCTGCAATTGGGCACCCGTTCGCTGCTCGATCTGCTCAACGCCGAACAAGAATATCACAGCGCCCGCATCGACCAGGCGCAGGGAATACATATGCAATACCGCCTGGCCGTGCAGTGCCTCTACTTCAGCGACCGTATGCGAAGCACCTTCCGCCTGGATGAAGCTCGCCCGGTTTACGGCCCTACGATGTCCGGAGGGCGCGGACGATGA
PROTEIN sequence
Length: 467
MFEKDLPGRRYARLQKIMSLPFTRRHLAGAVCLAMGAGGMAAAQTADNGPLDMAGAVRAAIATHPSVRGAGEQVGQANAEVDAARAGYKPQITGGIENQINSYRNTSYDSRNVYTARLTGSQLVYDFGKVAGGVRKAESGVRAREAQVEQATDEVALNTAQAWVDAHLQQLLVQISREQLSAVMSITALVTERVAKGATSRSDMEQAHSRVEAMRSQLLGAEAEALRASLTLMHLTGRTAPVAITGDIPAELQSAACRDGAEADTPAVRAASARRDEARADLDVARAQRYPTVTLDGSVGQALTNGSRLYGEYRTTGQIGLNLSMPFYQGGRVQAQERGAIHQLRAYEDAVRQARLETAQGFADARAQFDGWAQREPVLQTRVASIDATRDLYRQQYLQLGTRSLLDLLNAEQEYHSARIDQAQGIHMQYRLAVQCLYFSDRMRSTFRLDEARPVYGPTMSGGRGR*